Arachis ipaensis: 107628851
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Entry
107628851 CDS
T04301
Name
(RefSeq) coatomer subunit alpha-2
KO
K05236
coatomer subunit alpha
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aip04131
]
107628851
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aip04147
]
107628851
Membrane trafficking [BR:
aip04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
107628851
Exosome [BR:
aip04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107628851
Exosomal proteins of bladder cancer cells
107628851
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_DCAF4
Beta-prop_SCAP
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
WD40_RFWD3
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
BPL_LplA_LipB_2
Motif
Other DBs
NCBI-GeneID:
107628851
NCBI-ProteinID:
XP_016186951
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Position
B03:complement(7621661..7627290)
Genome browser
AA seq
1218 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHSKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVHFH
NSQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDIVVSASLDQTVRVWDIGSLKRKAGPPSDDILR
LSQMNTDLFGGVDAVVKYVLEGHDRGVNWAAFHPTLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILATHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGDCLFYAKDRFLRYYEFSTQRETQVLTIRRPG
SLTLNQSPKTLSYSASENAVLLCSDVEGGSYELYTISKDGAFIGRGDMQEPKKGLGGSAV
FVARNRFAVLDKTSNQVLVKNLKNELVKKSALPIATDAIFYAGTGNLLCRSEDRVFIFDL
QQRLVIGDLQTPFIKYVVWSNDMESVALLSKHAIVIASKKLVHQCTLHETIRVKSGAWDE
NGIFIYTTLNHIKYCLPNGDSGIIKTLDVPIYITKVVGNTIFCLGRDGKNRAIAIDATEY
IFKLSLLKKRYDHVMNMIKNSQLCGQAMIAYLQQKGFPEVALHFVKDERIRFNLALESGN
IQIAVASATAIDEKDHWYRLGVEALRQGNAGIVEYAYQRTKNFERLSFLYLITGNVEKLA
KMLKIAEVKNDVMGQFHNALYMGDVRERVKILENVGHLHLAYITAKVHGLHDVAERLAAE
LGDDLPSLPEGKKPSLLMPPSPVITSGDWPLLRVMRGIFEGGFSNIEHDAEEEEYEAADG
DWGEELDMVDVDGIQNGDISAILDDGEPGEEDDGEGGWELEDLELPPEAETPKASGTRSS
VFVAPTPGMPVSQIWIQKSSLAADHAAAGNFDTAMRLLNRQLGIKNFTPLRSIFLDLHTS
SHSYLRAFSSAPVISLAVERGWSESSSPNVRGPPALPFKLSQLDEKLKAGYKSTTAGKFT
EALKTFTSILHTIPLIVVESRREVDDVKELIIIVKEYVLGLQMELKRREIKDNPARQQEL
AAYFTHCNLQTPHLRLALLNAMTVCYKAKNLATAANFARRLLETNPTVENHAKTARQVLG
AAEKNMTDTTQLNYDFRNPFVVCGATYVPIYRGQKDVSCPYCTARFVLSQEGQLCTVCDL
AVVGADASGLLCSPSQIR
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagttcgagaccaagagtaacagagtgaaggggcttagtttccacagcaag
aggccctggatccttgcgagtcttcacagtggtgtgatccaactatgggattaccgcatg
ggaaccctcatcgacaggtttgacgagcacgatggccccgttagaggtgttcatttccac
aattctcagcctctctttgtctccggaggggacgattacaagattaaagtttggaactac
aagctgcatagatgtttgttcactcttctaggacaccttgattatattcgcactgtgcaa
tttcatcatgagaacccgtggattgtgagtgccagtgatgatcagactattcgcatatgg
aactggcaatcacgaacatgtatatctgtcctaacggggcataatcattatgttatgtgt
gcttcattccatccaaaagaagatattgttgtgtcagcctctctggatcagactgttcgc
gtttgggatattggttctctcaaaaggaaggctgggcctccttcagatgatatattgcgt
ttgagtcagatgaacacggatctttttggtggtgttgatgcagttgttaaatatgtgttg
gaaggtcatgatcggggggtcaactgggctgcttttcatcctacacttcctctcattgtc
tctggagctgatgaccgacaagtgaaactttggaggatgaatgatactaaggcatgggaa
gtggatactctgcgtgggcacatgaataatgtttcatgtgttatgttccatgccaaacag
gacatcattgtatcaaattctgaagataaaagtattcgagtatgggatgcgacaaagcgc
actggaattcaaaccttccggagagagcatgatcgattttggattcttgcaacacatcct
gaaatgaatctgttggctgctggtcatgacagtggaatgattgtctttaaactggagaga
gaaaggcctgcttttgctgttagtggtgattgtttattctatgcaaaagaccggtttttg
cgttactatgaattttcaacacagagagagacacaagttcttacaattcgacgacctggt
tctttaaccctgaatcaaagtccgaagactctttcctatagcgcgtctgaaaatgcagtt
cttctctgttcagatgtggagggtgggtcttatgagttgtataccatatccaaggatggc
gcatttattggtaggggcgatatgcaagagccaaagaaaggtcttggtggatcagctgtc
tttgtggctaggaataggtttgctgtgctcgacaaaaccagcaatcaagtcctagttaaa
aatctgaagaatgagcttgttaaaaagagcgctctgccaattgccacggatgccatattt
tatgctggaacaggcaacttgttgtgtaggtcagaggatagggtttttatatttgatctt
cagcagaggcttgttattggggatcttcagaccccttttatcaagtatgttgtctggtct
aatgacatggaaagtgttgccttgctcagcaaacatgccattgtcattgcaagcaagaag
cttgttcaccaatgcaccctccatgagacaatccgcgtgaaaagtggagcatgggatgaa
aatggcatttttatttacacaacattaaatcatatcaagtactgccttcctaatggcgat
agcgggataataaaaacactggatgtcccaatatatatcacaaaagttgttggaaacacc
atattctgcttgggtcgggatgggaaaaacagagctatagctattgatgcgactgaatat
atctttaagctctctctcttgaagaaaagatatgaccatgttatgaacatgataaagaac
tcccagctttgtgggcaggctatgattgcatatctacagcagaaagggtttcctgaagtt
gccctccattttgtgaaagatgagagaattcggttcaatttggctttagagagtgggaac
attcaaattgccgttgcatcagccactgcaattgatgagaaagatcactggtatcgatta
ggggttgaagctcttcgacaaggaaatgctggtatagtagaatatgcataccagaggacc
aaaaattttgagagattgtctttcctttatctcattactggtaatgtggagaaacttgca
aagatgttgaaaattgccgaagtcaagaacgatgtgatgggccagtttcacaatgcctta
tatatgggtgatgtccgagagcgtgttaagattttggagaatgtgggtcatttgcatctg
gcatacatcactgccaaagtccatggactacatgatgttgctgaaaggcttgcagctgaa
ctgggggatgatcttccatctttgcctgaggggaaaaaaccatctctcttgatgccacca
tcacctgtaataaccagtggtgattggccccttcttagggtgatgcgaggcatatttgaa
ggtggctttagcaatatagagcacgatgctgaagaagaagagtatgaagctgctgatggt
gattggggtgaggagcttgatatggttgatgtggatggcatacaaaatggagacatttct
gcaattttggatgatggagagccgggtgaagaggatgatggagaaggtggatgggagctg
gaagatctggagcttccccctgaagctgaaactccaaaagcttctggtactcgatcttca
gttttcgtggccccaacacctggtatgccagttagccagatatggattcagaaatcatct
cttgcagctgatcatgcagctgctggcaattttgatacggcaatgaggttactgaacagg
caacttggaataaagaacttcactcccttgagatccattttccttgatcttcatactagc
agccactcctatctgcgtgccttctcatctgccccagttatatcgcttgctgttgaaaga
ggttggagcgagtcatctagtccaaatgtgagaggcccacctgcactgccgttcaaactg
tctcaattagatgaaaagctcaaagctggttataaatcaactacagcagggaaattcacc
gaggccctaaagacatttaccagtattcttcatacaattcctttgattgtcgttgagtcg
aggagggaagttgatgatgtgaaggaattgattattatagtcaaagaatatgttttgggt
ctgcaaatggagctaaagagaagggaaattaaggacaatccagctcgtcagcaggagctt
gccgcatattttacccattgcaatctccagacacctcatttgaggctagctttgcttaat
gcaatgactgtctgctacaaggcaaagaaccttgccacagctgccaactttgcgaggagg
ctactcgagaccaatcctactgtcgaaaaccatgccaagacagcacggcaagttctggga
gctgcagaaaagaacatgaccgataccacgcagttgaactatgatttcagaaacccattt
gtggtttgtggtgcaacttatgtgccaatttaccgcggacagaaggatgtttcttgcccg
tattgcactgcacgctttgtgctgagccaggagggtcagctatgcactgtgtgtgacctt
gcagttgtaggggccgatgcttctggattgctctgttctccttcccagatacgttga
DBGET
integrated database retrieval system