Arachis ipaensis: 107629074
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Entry
107629074 CDS
T04301
Name
(RefSeq) serine/arginine repetitive matrix protein 1
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
aip
Arachis ipaensis
Pathway
aip03013
Nucleocytoplasmic transport
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107629074
03015 mRNA surveillance pathway
107629074
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107629074
03041 Spliceosome [BR:
aip03041
]
107629074
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107629074
Spliceosome [BR:
aip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
107629074
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
107629074
NCBI-ProteinID:
XP_016187253
LinkDB
All DBs
Position
B03:4906247..4912230
Genome browser
AA seq
866 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQLKLLKSQKFAPELEHLVDMTKVNMEVMKPWITRRVTELL
GFEDEVLINFIHSLLDAKEVNGKEIQIQLTGFMEKNTGKFMKELWTLLLSAQKNASGVPQ
QFLDAKEEELRKKKVENDKITSEIQRKREKEDREFMEVRLKKLDGGFDAKDNDTALDSTT
GHYVQDGKESDKRNGVRGRSRVSRSPRSPAVSVSPNRRGSPSRSMSKSFSNSRSYSGGRH
RSRSISRSPEARRRSPSSDRIRRSPRRRSISPRRYSPRRSPYRRPPYSRRRSRSRSTYRS
PSPLRRRMHSPYRRSSPSYRRRRSPSPVKRRRSPSPMRRRRSPSPIRRRRSPSPVRRRRS
PSPVRRQRSPSPLRRRSPIMRYRSPPVRRMPPTHLRSRSGSPMQSTSPIRRRDGSQSPQR
RSPSPLRRRSPGFVKRRSPSPSPRRSPPNEWSSQSPARHVSTSPVKRTSSRRQRSPVQPS
RGRVRTPEELSPVAHQHPKDKDHKASRTKSPDSVSSGEKSPPRSVSPQPRRRNSSEDRSP
PKSPVRQRRDKLTHERSLSPPKRPRTQKPRHDSPETSEDAEGTYHSRDNRDPNSKSSGKR
TKYLSPVSKRKNSPAKFHDEADFSPEMAAGRVSSGSRHYDNTDGSRKGREIKGDISSGKG
DESYVRPKSPRNKESYSSEKPHESYAVDTKKSDDKDHSLSNYAKNSDRRNKSEATRDLVG
KVDRVNHSASYDSVSEESDKHRREGKEKRKHRKSEKKVVSSDEDYSSDSEMEDRKDAKRR
KKEEKKLRKEEKRRRREEKRRRREERRAEKLKMKGKTDYSSDDEEAERMDHRRSDNDEML
SEQKKLEIELRNKALESLKAKKGMNN
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggtttctttcggggcacatctgcggatcaggacactcggttttcgaataaa
caattgaagctgctgaagtcgcaaaagtttgcccccgaattggagcacctggtggacatg
acaaaggtgaacatggaggtgatgaagccttggatcaccagaagggtgactgagcttctc
gggttcgaagatgaagtgcttattaactttatacacagtctgcttgatgcgaaggaagtg
aatgggaaggaaatccagatacaacttactgggtttatggaaaaaaacactggaaagttc
atgaaagagctttggacgcttcttctcagtgcacagaaaaatgccagtggtgttcctcag
cagttcttggatgccaaagaagaagaactccggaagaagaaggttgaaaatgataaaata
actagtgaaattcagaggaaaagagagaaagaagatagagagttcatggaagtgaggctg
aaaaaactggacggtggatttgatgcgaaggataatgatactgctttggactcaaccaca
gggcactatgttcaggatggaaaagaaagtgacaagaggaatggtgttagaggaaggagc
agggtttctaggtccccgcgctcacctgctgtttctgtttcgcctaatcgcagaggctcg
ccttcaaggtcaatgagtaaatcattttcaaattcacgaagctattcgggtggtagacat
agatcgaggagtatatctaggtctccagaagctagaagacgctccccatcttctgatagg
attcgccgttctccacgacgacgatccatttctcctcggaggtattcacctaggcgatcc
ccttaccggaggcctccatattcaaggagaagatctagatcccgctcaacttatagatct
ccttctcctctacgacgtagaatgcattccccctaccgtcgtagttcaccctcttaccgt
cgacgcagatcaccttctcctgtgaaaagacgcagatcgccttctccaatgcgtcgacgt
agatctccttcaccaatccgtcgacgtagatcaccttctccagtgcgtcgacgcagatca
ccctctcctgtaaggcgacaaaggtcaccctctccactgcgacgtcgatctcccatcatg
cggtatagatctccacctgtgcgccgaatgcctccaacccatctacggtctagatcagga
tctcccatgcaatccacttctcccatacgtcgaagggacgggagtcaaagtccacaacgc
agatctccatctcctctgcggcgtagatcacctggttttgttaagagaagatcaccaagt
ccttctccgaggaggtctcctccaaatgaatggagctctcagtccccagcacggcatgta
tctacatctccagtaaagagaacttcgtcaagacgtcaaaggagtcctgtgcagccttct
agggggagagtcagaacaccggaagaattgtcacctgtggcgcatcaacacccaaaagat
aaggatcataaagcttcacgcactaaatcgccagactcagtttcgtcaggtgagaagtct
ccaccacgatcagtgtctccacaaccaaggaggaggaatagcagtgaagacaggagtcca
ccgaagagcccggtgaggcaaagaagagacaagttgacccatgaaagaagcttgagtcct
ccaaagagaccaagaacccagaaacctcgccatgatagcccagagacaagtgaagatgca
gaaggaacataccattctagagacaacagagatcctaattcaaagtcatccggaaagaga
acaaaatatttatccccagttagtaagcggaaaaactcgcctgcaaagtttcatgatgag
gcagatttctctcccgaaatggcagctggtcgcgtttcttctgggtctcgtcactatgat
aacactgacgggagtaggaaagggcgagagattaaaggtgatatttcttctggaaaaggt
gatgaatcttatgtgcgacctaaatcgccaaggaataaagaaagttattccagtgagaag
cctcatgaatcttatgctgtagatactaagaagtctgatgacaaggatcattctctttca
aactatgcaaaaaatagtgataggcgcaacaaatcagaagcaactcgagatttagttgga
aaagttgatcgtgtcaatcatagtgcttcctatgattctgtttctgaggaaagtgacaaa
cataggagggaagggaaggaaaagagaaaacatagaaagtcagagaaaaaagttgtgtca
tcagatgaagattatagttctgattctgaaatggaggacaggaaagatgctaagaggagg
aaaaaggaggagaagaagctgcggaaggaggagaaacgtcgaagacgggaagagaaaaga
cgccgaagggaagaacggcgagcagagaagctgaaaatgaagggtaaaactgactatagt
tcagacgatgaggaagctgaacgaatggatcatcgtcgtagtgataatgacgagatgttg
tctgaacaaaagaagcttgagattgagttgcggaataaggctcttgaatctctcaaagca
aagaagggcatgaataactga
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