Arachis ipaensis: 107629287
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Entry
107629287 CDS
T04301
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aip04131
]
107629287
Membrane trafficking [BR:
aip04131
]
Protein recycling
Others
EARP complex
107629287
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
DUF6963
Motif
Other DBs
NCBI-GeneID:
107629287
NCBI-ProteinID:
XP_016187522
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All DBs
Position
B03:2641008..2653637
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AA seq
1096 aa
AA seq
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MQPNLFPFASVLGNPFTLNTSSFNTGNGEVSEGIDSSRVFFLLPFFLLSQGGGAMDLSKV
GEKILSSVRSARSLGLIPSVSDRPEVPARAAAAAAVARALAGLPPHQRYSLSSSSEELSS
IYGSRPNSQVVEELEDEFYEEDFDPIKHVLEHTPAEDDELTYLEKQAALRLAQLDRVAER
LSRHVMQHHEVMVKGMDLVRELEKDLRIANVICMNGRRHLTSSMNEVSRDLIVNSHSKKK
QALLDVLPILSELQRALDMQVTLESLAEEGNYCKAFQVLSEYLQLLDSLSELSVIQEMSR
GVEVWLGKTLQMLDALLLGVCQQFKENGYITVIDAYALIGDTAGLAEKIQSFFMQEVISE
THTVLKAIVLEDEEDASQNSRLTYSDLCLQIPESKFRQCLLRTLAVLFDIMRSYHEIMDF
QLEREESAAQTSTMAQEVDSDERSRSNCGEEPATNSEATGPSYIDSHDPINEASKEDIVA
SSSESPWYHLRKEATAFVSQTLQRGRKNLWHLTASRMSVLLSSPAACSASIHQFLRNYED
LSVFILAGEAFCGVEAVEFRQKLKVVCENYFNAFHRQNVHALKMVLDKETWLKLPPDTVQ
LVSFAGLTGDGAPLISLSGGKSLNSGAIQSDKSMNMVHTSARRSGFSNWVKGGNPFLHKL
SASREGHGYSQSNGSIHSELEGGSNNFNGDKESPGKNDSNKMNGGNSVSEDENEDLLADF
IDEDSQLPSRRSKPHRRVPSSHGNDADNTTQTGSSLCLLRSMDKYARLMQKLEVINVEFF
KGMCQLFEIFFYFIYEIFGQQNTNSSGKSSSNSLNYRLKTALSRISQDCDEWIKTHSSSP
SSLVHAELKPTSPPSTNFSHSSATSFGLQERCVAVDTISVVAQILNRSKAHLQSMLLRSN
STVLEDFFVHLVDAVPDLVEHVNRTTVRLLLHINGYVERVANAKWEVKELGMEHNGYVDL
LLGEFKHFKTRLAHGGLRKEIQDLLLDYGLEIVAETLVEGLSRVKRCSDEGRALMSLDLQ
VLINGLQHFVSFNVRPKLQMVETFIKAYYLPETEYVHWARAHPEYTKSQIVGLINLVATM
KGWKRKTRLEVLEKIE
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaatcttttcccctttgcaagcgttctcgggaatccgttcacactcaatacc
agtagcttcaacactggtaatggcgaagtaagcgaggggatcgatagctctagggttttc
ttcttgctccctttcttcttgctctctcagggaggaggagctatggatctctctaaagtc
ggcgaaaagatcttgagttccgttaggtccgctaggtctctcggcttgatcccttccgtc
tccgatcgccccgaggttccagctcgagctgctgctgcagctgctgtagctcgtgctctt
gcaggattacctcctcatcagaggtatagtctttcatcaagttcagaagaactgagttca
atatatggtagcagaccaaatagccaagtggtggaggaactagaggatgaattttatgag
gaggattttgacccaattaagcatgttctagagcacactccagctgaagatgacgagctt
acatatttagaaaaacaggctgcccttagattagcacaactggacagagtagcagaacgt
ttatctcggcatgttatgcagcatcatgaagtaatggtgaaggggatggatttggtcaga
gaattagaaaaagacttgagaattgcaaatgtcatatgcatgaatggaagaagacatttg
acctcatctatgaatgaggtttcaagggatctcattgtgaattcacattcaaaaaagaaa
caagcacttctggacgttcttccaatcttgagtgagcttcaacgtgcgttggacatgcaa
gtgacacttgaatctcttgcggaagaaggaaattactgcaaagcatttcaagtcctctct
gagtatttgcaactcttggatagtttgtcagagctttcagtaatacaagagatgagccgg
ggtgtggaggtttggctgggaaaaactttacagatgctggatgctctcttattgggggta
tgtcagcaattcaaggaaaatggctatataacagtaatagatgcatatgcattgataggg
gatactgctggtcttgctgaaaagatacagagtttcttcatgcaagaagttatatcagaa
acacacactgtattgaaggctattgtgcttgaggatgaggaggatgcttcccaaaatagt
aggctcacttacagcgacctatgccttcaaatacctgagtctaaatttaggcaatgcttg
ttaagaacattggctgtactatttgacattatgcgttcataccatgaaattatggatttt
cagctggagagagaggagtcagcagcacaaacttcaactatggcccaggaagttgattca
gatgaaagaagccgcagcaattgtggggaggaacctgcaacaaacagtgaagctactgga
ccatcatacattgattctcatgatcccataaatgaggctagtaaggaggatattgtggca
tcaagcagtgaatccccatggtaccatcttcgcaaagaagctacagcatttgtttcacaa
acccttcaaagaggtcgcaagaatttgtggcatctcactgcaagtcgtatgtcagtctta
ctttcttctcctgcagcatgttctgcaagtattcaccaattcttgagaaattatgaagat
ctaagtgttttcattttggctggggaagccttttgtggagttgaagcagttgagttcagg
cagaagttgaaggtcgtttgtgaaaactatttcaacgcttttcatcgacaaaatgtgcat
gcactaaaaatggttttagataaagagacttggctaaaattacccccagatacagtgcaa
ctagtcagctttgctggacttactggtgatggtgcaccgctaatttctttatctggtggt
aaatcacttaattccggtgcaatccagtctgacaaatcaatgaacatggttcacaccagt
gctagaaggagtgggttctctaattgggttaaaggtggaaacccttttttgcataagtta
tcagcctctagagaaggtcatggttattcccaatctaatggatcaatacatagtgaactt
gagggaggttcaaataactttaatggtgataaagagtcacctggaaagaatgattccaac
aagatgaatggtggcaattctgtttcagaagatgaaaatgaggatcttcttgcggacttt
attgatgaagacagtcaattgccaagtcgtcgttctaaaccccatcgaagagttccctct
tctcatggtaatgatgcagataatactacacaaactggatcttctttgtgtcttttaaga
tctatggataaatatgcaaggcttatgcagaagttagaagtaataaatgttgagttcttt
aagggaatgtgccaattgtttgaaatttttttctattttatatatgaaatatttggtcag
caaaacactaattcaagtggaaaaagctcaagcaactctctcaactatcggttgaagaca
gccttatcaagaataagccaagattgtgatgagtggattaagacccactcatcttcacca
tcatctcttgtacatgcagagttgaagcctacgagccctcccagcacaaatttcagtcac
tcttcggcaacttcttttggtctccaggaaagatgtgtagctgttgacactatctctgtt
gttgctcaaatattgaatagatccaaagctcatctccaatcaatgctattgcgaagtaat
tcaactgtacttgaagatttctttgtgcatctggtggatgctgtacctgatcttgtagag
catgttaatcggacaacagttagattattgctgcacattaatgggtatgttgagcgcgtc
gccaatgctaaatgggaggtaaaagagcttgggatggagcataatgggtatgttgatttg
ttgctgggtgaatttaagcattttaaaacacgacttgctcatggaggacttcggaaagag
attcaagacctattattggattatggactcgaaatcgtagcagaaactcttgttgaagga
ctttcacgggtgaagagatgtagtgacgaaggaagagctctaatgtcattggatctgcag
gttttgatcaatggcttacagcattttgtgtcgtttaatgtgaggcccaagttacaaatg
gttgaaactttcattaaggcttattacctgccagagacagaatatgtacattgggcacgt
gcacatccagaatacactaaaagccagattgttgggttgatcaaccttgttgccactatg
aaaggttggaagaggaaaacgaggttggaagtactggaaaagattgaatga
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