Arachis ipaensis: 107629389
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Entry
107629389 CDS
T04301
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aip03036
]
107629389
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
107629389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_16
AAA_22
AAA_18
nSTAND3
AAA_14
Viral_helicase1
NPHP3_N
NACHT
AAA_30
ATPase_2
Cytidylate_kin
AAA_28
TIP49
ABC_tran
AAA_24
RNA_helicase
AAA_2
TsaE
DUF815
AAA_5
RuvB_N
AAA_33
AAA_11
AAA_17
AAA_7
Rad17
KAP_NTPase
NB-ARC
IstB_IS21
bpMoxR
nSTAND1
PduV-EutP
AAA_19
AAA_3
AAA_13
Mg_chelatase
nSTAND6
Cytidylate_kin2
SLFN-g3_helicase
SRPRB
CPT
NTPase_1
Sigma54_activat
ResIII
Motif
Other DBs
NCBI-GeneID:
107629389
NCBI-ProteinID:
XP_016187656
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Position
B03:1459868..1464953
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AA seq
466 aa
AA seq
DB search
MATATSPTVPMEEEDDVTATATATNQNLQTHQNGVVPSSPMLPVSDDKILLPVEVCLKPS
STASIRDVRSAIERMLEKRSLSYCDGPIPLPMDEPFLADNVHRICICDTDEGMHNDNVLL
FWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIFESGLKQRLLR
YAASALLFTEKGVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFNSRFPQCQLIE
VNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAAISGSEPS
DSIRVVNALLTQIDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYIGPPTLQARYEIL
RSCLQELMRTGILTSLQGCDNTTLPSYASAKDRSSAPDFHEVTASMQLCNQLLETAKACE
GMSGRSLRKLPFLAHAALANPFHCNPIKFLCTMIETAKRERSELPD
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggctactgcgacttctcccactgttcctatggaagaagaagatgacgtcacagccaca
gccacagccacaaaccaaaaccttcaaactcatcaaaacggcgtcgttccttcttctccc
atgcttcccgtttccgacgacaaaatccttctccctgttgaggtctgcttgaagccttcc
agcactgcttctatccgtgacgttcgttccgctatcgaaaggatgcttgagaagaggagt
ttgagctattgtgatggccccattcctctccccatggacgagccctttctcgccgacaac
gtccacagaatttgtatttgtgacacagatgaagggatgcacaatgataatgttcttttg
ttctggcaagtcaagccagttgtccatgtctttcagcttagcgaggaaggaccatgtgag
gatataagctctgatggccagagttccagcttcaatgaatggattcttcctgcaaaagaa
tttgatggcatgtgggaaagtttaatattcgaatctggtctaaagcaaaggttgttacgt
tatgcagctagtgctttgctctttactgaaaaaggtgttgatccattccttgtttcatgg
aatcgcataattcttctacatggaccccctgggactggaaagacttcgttgtgtaaagca
ttagctcagaaattatcgattcgattcaattcaagattcccacagtgccagcttattgaa
gtgaatgcacattctttattcagtaaatggttttctgaaagtggcaagctggttgcgaaa
cttttccaaaagattcaagaaatggtagaggaagaaagcaatctagtatttgttttgatt
gatgaagtcgaaagccttgctgcggccaggaaagctgctatatccggttcagaaccttca
gattctattcgggttgtaaatgcattactaactcagattgacaagttaaaatcatctcca
aatgtgataattctaaccacatccaacataactgctgctattgatattgcttttgtcgac
cgagctgatattaaagcatatattggtcccccgacacttcaagctcgatatgaaatatta
aggtcttgcttgcaggaattgatgcgtacggggatcttaactagtttacagggttgtgat
aacaccacacttccaagttatgccagtgcaaaggataggtcgagtgcaccggattttcat
gaggttactgcatccatgcaactatgcaaccaacttcttgaaactgccaaggcctgtgag
ggaatgagtgggaggtccttgagaaagcttccatttttggcacatgctgcccttgccaat
cctttccattgcaaccctattaagttcttatgtacaatgattgaaacggcaaagagggag
cgttctgagcttcctgactaa
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