Arachis ipaensis: 107629399
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Entry
107629399 CDS
T04301
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
aip
Arachis ipaensis
Pathway
aip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107629399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107629399
03009 Ribosome biogenesis [BR:
aip03009
]
107629399
04131 Membrane trafficking [BR:
aip04131
]
107629399
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aip04147
]
107629399
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107629399
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107629399
Membrane trafficking [BR:
aip04131
]
SNARE
SNARE associated proteins
Others
107629399
Autophagy
Aggrephagy
Other aggrephagy associated proteins
107629399
Exosome [BR:
aip04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
107629399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_5
AAA_33
AAA_22
AAA_14
NPHP3_N
TIP49
RNA_helicase
AAA_17
Mg_chelatase
nSTAND3
ATPase_2
AAA_28
Parvo_NS1
AAA_18
IstB_IS21
ABC_tran
AAA_lid_PRS2_C
AAA_7
DUF815
NACHT
NB-ARC
AAA_24
Viral_helicase1
TsaE
ResIII
Vps4_C
Zeta_toxin
SLFN-g3_helicase
Rad17
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
107629399
NCBI-ProteinID:
XP_016187669
LinkDB
All DBs
Position
B03:complement(1180232..1185002)
Genome browser
AA seq
767 aa
AA seq
DB search
MAKGQSSSSDHSIFFRGDTVLVKGKKRKDTVCIVLADDQCEEPRIRMNKVVRSNLRVRLG
DVVSVHQCSDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGG
MRSVEFKVIETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRE
LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVANETGAFFFLINGPEIMSKL
AGESESNLRKAFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTR
SHVIVIGATNRPNSIDPALRRFGMFDREIDIGVPDEVGRLEVLRIHTKNMKLSDNVDLER
VARDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFQTALTS
SNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG
PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE
LDSIATQRGGSRGDSGGADRVLNQLLTEMDGMSVKKTVFIIGATNRPDIIDPALLRPRRL
DQLIYIPLPDESSRLQIFKACLRKSPISKDVDLSALARYTHGFSGADITEICQRACKYAI
REDIEKDIEMERRKIESPEAMEEDNEDTDVVAEIKPSHFEESMKFARRSVSDADIRKYQL
FAQTLQQSRGFGLEFRFADRTTDTTSAAGASDPFSSATAEGDDDLYG
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctaagggtcaatcctcatcttctgatcactcaatttttttccgaggggatactgtt
ctggttaaggggaagaagagaaaggacactgtttgcattgttcttgctgatgatcagtgc
gaagagccgagaattcggatgaacaaagttgtaaggtctaatcttagggttaggcttgga
gatgttgtctctgttcatcaatgttctgatgtcaagtatgggaagcgagttcacatcctt
cccattgatgatactatcgagggtgtcactggcaacttgtttgatgcatatctcaagcca
tattttatggagtcgtaccgacctgtgaggaaaggggacttgtttcttgttagaggcgga
atgcgaagtgttgaattcaaggtgatagaaactgatcctggtgaatattgtgtcgtggca
ccggatactgaaatcttctgcgagggagagccgattaaacgcgaggatgaagagagacta
aatgaagttggctatgatgatgttgggggtgttaggaagcaaatggctcaaattcgtgag
ctcgtagaacttccactcaggcatccgcaactcttcaaatcgatcggtgttaagcccccg
aaaggaatcttgctttatggaccgccaggttccgggaagactctgattgcaaaagcagtt
gctaatgagacaggtgcgttcttctttttgatcaatggaccggaaatcatgtcgaagctg
gctggtgaaagtgaaagcaatctgaggaaggcatttgaagaagccgaaaagaattcccct
tctatcatttttattgatgaattggattcaattgctccaaaaagagaaaagacacatggt
gaggtagagaggcgtatagtatcgcaacttttgactctaatggatggcctcaagacccgt
tcgcatgttatcgtgatcggagcaacaaataggcccaacagtattgatcctgctttgaga
aggtttggaatgtttgatcgcgaaattgatatcggtgtaccagatgaagttggaaggttg
gaggttcttagaattcatactaaaaacatgaagctttctgataatgttgatcttgaaaga
gttgcaagggacactcatggttatgtaggagcagatcttgctgctctatgcacagaggct
gcgctgcagtgtataagagagaagatggatgtgattgacttggaagatgaatcaatagat
gctgagattctgaattccatggctgttaccaatgagcacttccaaactgctttgacttct
tcgaacccgtctgcgttgcgtgaaacagttgtggaggttccaaatgtttcctgggatgac
attggaggtctagagaatgttaaaagggagcttcaagagacggttcaatacccggtggaa
catcctgagaagtttgagaaattcggcatgtcgccttccaaaggtgttcttttctatggc
cctccgggctgcggcaaaaccctgcttgcaaaagctattgcaaatgaatgccaggctaac
ttcataagtgtcaagggacctgagttgcttactatgtggtttggtgaaagtgaggcaaat
gttcgcgagatattcgacaaggcccggcagtctgcaccatgtgtgcttttctttgatgaa
ctcgactctattgcaacccagcgaggaggttcaagaggggattccggcggtgctgataga
gtgttgaaccaactactaacagagatggatggaatgtctgttaagaaaacagtgttcatc
attggagcaacaaacagacctgacattatagaccctgcattgcttcgaccaagacgtctt
gaccaattgatatacattcctttaccggatgagagttcacgtctccagatcttcaaggcg
tgcttgaggaagtcaccaatctcgaaggacgtcgatctttcggctcttgctcgttataca
catggatttagtggtgcagacattactgagatttgtcaaagagcttgcaagtatgccatt
agagaagatattgagaaggacattgagatggagagaagaaaaatagagagccctgaagcc
atggaagaagataatgaagacactgatgtagtggctgagataaaaccatcacactttgag
gagtccatgaagtttgctcggaggagtgtcagcgacgccgacatcagaaaataccaactg
tttgctcagacattgcaacagtctcgcgggttcggattggagttccggttcgcagatcgg
actactgataccacttctgctgctggtgcctctgaccctttctcatctgctacagctgaa
ggagatgatgatctatatggttaa
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