KEGG   Arachis ipaensis: 107629399
Entry
107629399         CDS       T04301                                 
Name
(RefSeq) cell division cycle protein 48 homolog isoform X1
  KO
K13525  transitional endoplasmic reticulum ATPase
Organism
aip  Arachis ipaensis
Pathway
aip04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107629399
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aip03019]
    107629399
   03009 Ribosome biogenesis [BR:aip03009]
    107629399
   04131 Membrane trafficking [BR:aip04131]
    107629399
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aip04147]
    107629399
Messenger RNA biogenesis [BR:aip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     107629399
Ribosome biogenesis [BR:aip03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    107629399
Membrane trafficking [BR:aip04131]
 SNARE
  SNARE associated proteins
   Others
    107629399
 Autophagy
  Aggrephagy
   Other aggrephagy associated proteins
    107629399
Exosome [BR:aip04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   107629399
SSDB
Motif
Pfam: AAA AAA_lid_3 CDC48_N RuvB_N AAA_16 CDC48_2 AAA_2 AAA_5 AAA_33 AAA_22 AAA_14 NPHP3_N TIP49 RNA_helicase AAA_17 Mg_chelatase nSTAND3 ATPase_2 AAA_28 Parvo_NS1 AAA_18 IstB_IS21 ABC_tran AAA_lid_PRS2_C AAA_7 DUF815 NACHT NB-ARC AAA_24 Viral_helicase1 TsaE ResIII Vps4_C Zeta_toxin SLFN-g3_helicase Rad17 KAP_NTPase Zot
Other DBs
NCBI-GeneID: 107629399
NCBI-ProteinID: XP_016187669
LinkDB
Position
B03:complement(1180232..1185002)
AA seq 767 aa
MAKGQSSSSDHSIFFRGDTVLVKGKKRKDTVCIVLADDQCEEPRIRMNKVVRSNLRVRLG
DVVSVHQCSDVKYGKRVHILPIDDTIEGVTGNLFDAYLKPYFMESYRPVRKGDLFLVRGG
MRSVEFKVIETDPGEYCVVAPDTEIFCEGEPIKREDEERLNEVGYDDVGGVRKQMAQIRE
LVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIAKAVANETGAFFFLINGPEIMSKL
AGESESNLRKAFEEAEKNSPSIIFIDELDSIAPKREKTHGEVERRIVSQLLTLMDGLKTR
SHVIVIGATNRPNSIDPALRRFGMFDREIDIGVPDEVGRLEVLRIHTKNMKLSDNVDLER
VARDTHGYVGADLAALCTEAALQCIREKMDVIDLEDESIDAEILNSMAVTNEHFQTALTS
SNPSALRETVVEVPNVSWDDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYG
PPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDE
LDSIATQRGGSRGDSGGADRVLNQLLTEMDGMSVKKTVFIIGATNRPDIIDPALLRPRRL
DQLIYIPLPDESSRLQIFKACLRKSPISKDVDLSALARYTHGFSGADITEICQRACKYAI
REDIEKDIEMERRKIESPEAMEEDNEDTDVVAEIKPSHFEESMKFARRSVSDADIRKYQL
FAQTLQQSRGFGLEFRFADRTTDTTSAAGASDPFSSATAEGDDDLYG
NT seq 2304 nt   +upstreamnt  +downstreamnt
atggctaagggtcaatcctcatcttctgatcactcaatttttttccgaggggatactgtt
ctggttaaggggaagaagagaaaggacactgtttgcattgttcttgctgatgatcagtgc
gaagagccgagaattcggatgaacaaagttgtaaggtctaatcttagggttaggcttgga
gatgttgtctctgttcatcaatgttctgatgtcaagtatgggaagcgagttcacatcctt
cccattgatgatactatcgagggtgtcactggcaacttgtttgatgcatatctcaagcca
tattttatggagtcgtaccgacctgtgaggaaaggggacttgtttcttgttagaggcgga
atgcgaagtgttgaattcaaggtgatagaaactgatcctggtgaatattgtgtcgtggca
ccggatactgaaatcttctgcgagggagagccgattaaacgcgaggatgaagagagacta
aatgaagttggctatgatgatgttgggggtgttaggaagcaaatggctcaaattcgtgag
ctcgtagaacttccactcaggcatccgcaactcttcaaatcgatcggtgttaagcccccg
aaaggaatcttgctttatggaccgccaggttccgggaagactctgattgcaaaagcagtt
gctaatgagacaggtgcgttcttctttttgatcaatggaccggaaatcatgtcgaagctg
gctggtgaaagtgaaagcaatctgaggaaggcatttgaagaagccgaaaagaattcccct
tctatcatttttattgatgaattggattcaattgctccaaaaagagaaaagacacatggt
gaggtagagaggcgtatagtatcgcaacttttgactctaatggatggcctcaagacccgt
tcgcatgttatcgtgatcggagcaacaaataggcccaacagtattgatcctgctttgaga
aggtttggaatgtttgatcgcgaaattgatatcggtgtaccagatgaagttggaaggttg
gaggttcttagaattcatactaaaaacatgaagctttctgataatgttgatcttgaaaga
gttgcaagggacactcatggttatgtaggagcagatcttgctgctctatgcacagaggct
gcgctgcagtgtataagagagaagatggatgtgattgacttggaagatgaatcaatagat
gctgagattctgaattccatggctgttaccaatgagcacttccaaactgctttgacttct
tcgaacccgtctgcgttgcgtgaaacagttgtggaggttccaaatgtttcctgggatgac
attggaggtctagagaatgttaaaagggagcttcaagagacggttcaatacccggtggaa
catcctgagaagtttgagaaattcggcatgtcgccttccaaaggtgttcttttctatggc
cctccgggctgcggcaaaaccctgcttgcaaaagctattgcaaatgaatgccaggctaac
ttcataagtgtcaagggacctgagttgcttactatgtggtttggtgaaagtgaggcaaat
gttcgcgagatattcgacaaggcccggcagtctgcaccatgtgtgcttttctttgatgaa
ctcgactctattgcaacccagcgaggaggttcaagaggggattccggcggtgctgataga
gtgttgaaccaactactaacagagatggatggaatgtctgttaagaaaacagtgttcatc
attggagcaacaaacagacctgacattatagaccctgcattgcttcgaccaagacgtctt
gaccaattgatatacattcctttaccggatgagagttcacgtctccagatcttcaaggcg
tgcttgaggaagtcaccaatctcgaaggacgtcgatctttcggctcttgctcgttataca
catggatttagtggtgcagacattactgagatttgtcaaagagcttgcaagtatgccatt
agagaagatattgagaaggacattgagatggagagaagaaaaatagagagccctgaagcc
atggaagaagataatgaagacactgatgtagtggctgagataaaaccatcacactttgag
gagtccatgaagtttgctcggaggagtgtcagcgacgccgacatcagaaaataccaactg
tttgctcagacattgcaacagtctcgcgggttcggattggagttccggttcgcagatcgg
actactgataccacttctgctgctggtgcctctgaccctttctcatctgctacagctgaa
ggagatgatgatctatatggttaa

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