Arachis ipaensis: 107629647
Help
Entry
107629647 CDS
T04301
Name
(RefSeq) polygalacturonase QRT2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
aip
Arachis ipaensis
Pathway
aip00040
Pentose and glucuronate interconversions
aip01100
Metabolic pathways
Module
aip_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107629647
Enzymes [BR:
aip01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
107629647
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
107629647
NCBI-ProteinID:
XP_016187970
LinkDB
All DBs
Position
B03:complement(12296466..12300161)
Genome browser
AA seq
453 aa
AA seq
DB search
MSLLLRLFISLYITLASLGLCFSYYIEEPFHHTNVEPYIVHHDGRFIKRKHEHFGLMMRA
NRAKNLHFSRSSGTISVNDFGARADGSDDSRAFEKAWNEACSSGVTLVVPERRTYTLKPI
RFSGPCRPNTAFMIYGTIKAWPEMSAYEDDRKHWIVFDSVNNFRVDGGGTFNGNGKKWWQ
NSCKTNDNLPCKDAPTAVTFYQCKNLRVANVRLKDAQQMHVAFESCFNVIVSNVLVRAPG
YSPNTDGIHVAETQNIVISDSDIGTGDDCISIVSGSQNVXVIYISLSNQCFCSIGSLGAD
NSEAVVSNVVVNRATLTGTSNGVRIKTWQGGSGYARNIKFLNIVMQNVTNPIIIDQNYCD
QEKPCHEQKSGVQLSNVLYQNIRGTSASEVAIKFDCSRTVPCREIYLEDVILEAEDGGNG
DTVATCQNVRYVNRGKFFPQCTPMRNNQRGGRF
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtctttattactaaggctatttatctcactttacattacccttgcttcattaggctta
tgttttagctattatatagaggaaccatttcatcacacaaatgttgaaccatacattgtt
catcatgatgggagatttatcaagagaaaacatgaacactttggcctaatgatgagagct
aatagagctaaaaaccttcatttttcaaggtcaagtggaacaattagtgttaatgacttt
ggagccagagctgatggaagtgacgacagtcgggcatttgaaaaggcttggaatgaagca
tgttctagtggggtcacccttgtggtgcctgaaagaaggacctacactcttaagccaata
agattttcaggtccatgcagacccaacactgcattcatgatatatggaacaattaaggca
tggccagagatgtcagcatatgaagatgatagaaaacattggattgtgtttgatagtgtc
aacaacttcagagttgatggtggtggcactttcaatggcaatggcaaaaaatggtggcag
aattcatgcaaaactaatgataaccttccatgcaaagatgcaccaactgctgtgacattt
taccaatgcaagaatttgagagtggcaaatgtgagattgaaagatgcacaacaaatgcat
gtggcatttgagagttgcttcaatgttatagtttccaatgttcttgttagagcaccagga
tatagtcccaacactgatggaattcatgttgctgaaacacaaaacattgttataagcgac
agtgacattggaacaggtgatgattgtatttcaatagtaagtggatctcaaaatgttant
gtaatttatataagtttaagcaatcaatgtttttgcagcattggaagcttaggagctgat
aactctgaagctgtagtgtccaatgtggttgtgaacagagccaccttaacaggaacaagt
aatggagttagaatcaagacatggcagggaggttctggttatgcaaggaacataaagttt
ttgaacatagtgatgcaaaatgtgacaaatcccataatcatagatcaaaactactgtgat
caagaaaagccatgccatgagcagaagtcaggagttcaactaagcaatgtgctttaccaa
aacatcagaggaacaagtgcttcagaagtggctataaaatttgattgcagcagaacagtg
ccatgcagagaaatctaccttgaggatgtgatattagaagcagaagatggtggcaatggc
gacacggttgccacgtgtcagaatgtaagatatgtgaaccgaggaaagtttttccctcaa
tgcactccaatgagaaataatcaaaggggaggaagattttaa
DBGET
integrated database retrieval system