Arachis ipaensis: 107630390
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Entry
107630390 CDS
T04301
Name
(RefSeq) LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase 40-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107630390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107630390
03009 Ribosome biogenesis [BR:
aip03009
]
107630390
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107630390
Spliceosome [BR:
aip03041
]
Complex A
U1 snRNP components
U1 related factors
107630390
Complex B
107630390
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
Pre-60S particles
Helicases
107630390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
107630390
NCBI-ProteinID:
XP_020974466
LinkDB
All DBs
Position
B03:41675621..41681488
Genome browser
AA seq
1167 aa
AA seq
DB search
MAAAEAAQAAAGPRYAPDDPTLPTPWKGLIDGSTGLLYYWNPETNVTQYEKPPPLPSGPA
PAASTPNMAPIPVAHAMQSGGMMGQHGQQMLQSSQQQGSNLAQQHGPMMPQQQSSHVASQ
QKPSPVAQGVQQQNLQLAQSMPQPGFNQAGQHSMPHQGQHSMQPQGQYPMQPQGQQMVQP
KGQQMTQQPHQMHYQMQPQGINAQQFGQGASQAQGSHSVQPQAHQFAPQNMHYMPYQPNM
PQPVQQSSQHNMHGHSYENQQDFKSAFPKIEEPEFKNENQVGVSPSNYQQTNXXXXPSGQ
VPDGGANAGHSKQFGGAPGSIQQSPSAVPLQQGSSYPVYQHGPSFQNQMGPGMMHGHPPN
VHPGSQKMGHADSFHGRAGNEYYYNSSKEMPAMGPQQPNIAPIPISTKQQDMRMSSGPFQ
NVMPSGNGSGIPGHPMHMFPPVGGHPPLSSNPLKGPPYMGSSDVTDMTPAEIYCQQHEVT
ATGDNIPPPFMTFDATGFPPEILREIYSAGFSNPTPIQAQTWPVALQGRDIVAIAKTGSG
KTLGYLMPAFILLRQRRNNPLNGPTVLVLAPTRELATQIQDEAVKFGRSSRFSCTCLYGG
APKAQQLKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRK
IVNEIPPRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGSVDELAANKAITQYVEFVPQM
EKQRRLEQILRSQERGSKVIIFCSTKRLCDQLARSIGRNYGAAAIHGDKSQSERDWVLNQ
FRSGKSPVLVATDVAARGLDIKDIRVVINYDFPTGVEDYVHRIGRTGRAGATGVSYTFFS
EQDWKHASDLIKVLEGANQHVPPELRQMTLRGPPNFGKERGGMSRFDSGGGGRWDNGGRG
GMRDGGFGGRGGMRDGGFSGRGGMRDGSFGGRGGMRESGFSNDGGMRDGGFGAHGASGQG
GRVDMFGGRGNRGRGFGGPRGGHAGWGRGDRGPNDRFNMDGRGRGRGRGRLDNRRDVGYR
NRGRSRSRSPERVRTWDYSSRSRSRSCSSRSWSRSRSRSRSRSWSRGRSRSRSYSPSPRR
SRSRSRSGRSYSRSRSPRRSPSYDRRDRTDQHHSDQKDYREPEVQAPNPGVSPSSQGQQN
SILGTDQVDQAPLVAGSGVPEDPNALA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcagaggcagctcaagctgccgctggtccacggtatgcacccgatgatccc
accctccctacgccatggaaggggctaattgatggaagcactggtcttttgtactactgg
aaccctgaaactaatgtcacccagtatgagaaacctccccctttgccttcgggccctgct
ccggctgcttctacacccaacatggcgcccatacctgtggctcatgcgatgcaatctggt
gggatgatggggcagcatgggcagcaaatgcttcagtcctctcaacagcaagggagtaac
cttgctcagcaacatgggccaatgatgccacaacagcagagttcgcatgtggcatctcag
cagaagccatctccggttgcacaaggggtgcaacagcagaatttgcagttggcacagtcc
atgccacaaccagggtttaatcaggctggacagcattcaatgccgcatcagggacagcat
tcaatgcagcctcagggacagtatcccatgcaaccccaagggcaacaaatggtccagcct
aaagggcagcagatgacacaacaaccacatcagatgcattatcagatgcagccccaaggt
atcaatgcccaacaatttggtcaaggagcatctcaggctcagggctcacattctgtgcaa
ccacaagcacatcaattcgccccccagaacatgcattatatgccatatcagccaaacatg
cctcaacctgtgcagcaaagttcccagcataacatgcatggtcattcttatgaaaaccaa
caagacttcaaatcagcattcccaaagatagaggaaccagagtttaaaaatgaaaaccag
gttggagtttcgccatctaactatcaacaaaccaatnnnnnnnnnnnaccatctgggcaa
gtgccagatggaggtgcaaatgctggtcactcaaaacagtttggtggcgcaccaggaagc
atacaacagtctccttctgcagtgccattacaacagggtagttcttatccagtttaccaa
catggtcctagctttcaaaaccagatggggcctggtatgatgcatggtcatccacccaat
gtccatcctggaagccaaaagatgggacatgcagatagttttcatggtagagctgggaat
gaatattactataactctagcaaagagatgccagctatgggtcctcagcagccaaatatt
gcaccaatacccatttcaacaaagcagcaggatatgagaatgagcagcggcccttttcaa
aatgtaatgcctagtggaaatggaagtggtatcccaggtcatccaatgcacatgtttcca
ccagtaggagggcatccacctctctcaagtaaccccttgaaaggacctccgtatatggga
tcttcagatgttactgatatgacacctgctgaaatttattgtcagcaacatgaagttaca
gcaacgggtgacaacattccacctccttttatgacatttgatgctactggatttcctcca
gagattttgagagagatatattctgctggcttctcaaacccaacaccaattcaggctcaa
acttggccagtagcactgcaaggtagggacatagtggcaattgcaaaaacaggctctggc
aaaacattgggctacttaatgcctgcattcatccttcttaggcagagaaggaataatcct
ttgaatggccccactgtcttggttttagctccaacacgtgaacttgctacacagatccaa
gatgaggccgtcaaatttggaagatcttcacgtttctcttgcacgtgtttgtatggtgga
gcacccaaagcccaacagctaaaagagttagatcggggagcagacattgttgttgccaca
cctggccgactcaatgacatccttgaaatgaagaaaattgactttgggcaagtttcactg
cttgtgcttgatgaggctgaccgtatgcttgacatgggttttgaacctcaaatccggaaa
attgttaatgagattccaccacgtaggcaaactctcatgtatacggcaacatggccaaaa
gaagtaagaaaaattgccagtgacctgctcgttaatcctgttcaggttaacattggaagt
gttgatgagcttgccgcaaataaagctatcacacagtatgttgaatttgtccctcaaatg
gagaagcagaggcgattagagcagatcctcagatcccaagaacggggctctaaggttatt
attttttgttccacaaagaggttatgtgatcaacttgcccgtagtattggtcgcaattat
ggggctgctgcaattcatggtgacaagtctcaaagtgagagggattgggttttaaatcag
ttccggagtgggaagtcaccagttttagttgccactgatgttgctgctcgtgggcttgac
atcaaggatataagggtggttataaactatgatttccctactggagttgaggattatgta
caccgaattggaagaactggacgggcaggtgctactggagtatcgtacacctttttctcg
gagcaggactggaaacatgcatctgatttaatcaaagtcttggagggtgcaaaccagcat
gtgcctccagagctaagacagatgaccttgcgcggaccaccaaactttggaaaagagcgg
ggtgggatgagtcgtttcgactctggtggtggtgggcgttgggacaacggtggtcgtggt
ggcatgagggatgggggctttggtggtcgtggtggcatgagagatggtggctttagtggt
cgaggcggcatgagggatggtagctttggtggccgaggtggcatgagggagagtggattc
agcaatgatggtggcatgagagatggtggctttggtgctcatggtgctagcggtcaaggt
gggagagttgatatgtttggtggtaggggaaatagaggtcgaggatttggtggccctcgt
ggtggtcatgctgggtggggtagaggggatcgtggtccaaatgaccgattcaacatggat
ggaagaggaagagggcgaggacgtgggcgattagacaacagaagagatgttggatacagg
aatagaggcagaagccgtagccgtagcccagagagagtacgaacatgggactatagtagc
agaagtcgtagtaggagttgcagcagtaggagctggagccggagccggagccgaagcaga
agccgcagttggtcgcgtggtcgcagtcggagtcgcagctatagccctagccctcgtcgg
agtcgaagccgcagtcgtagcggtcgcagttacagccgcagccgaagtccccgtagaagt
cccagctatgataggcgtgataggacagatcaacaccattctgatcaaaaggattataga
gaaccagaggtccaagctcccaatccgggagtgtctccaagctcccaagggcagcagaat
tcgattttgggaactgatcaagtggatcaggcgccactggttgctgggagtggtgtccca
gaagatcccaatgctctggcatag
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integrated database retrieval system
