Arachis ipaensis: 107630408
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Entry
107630408 CDS
T04301
Name
(RefSeq) DNA mismatch repair protein MSH2
KO
K08735
DNA mismatch repair protein MSH2
Organism
aip
Arachis ipaensis
Pathway
aip03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107630408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107630408
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107630408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
IFT57
ATG17_like
Motif
Other DBs
NCBI-GeneID:
107630408
NCBI-ProteinID:
XP_016189003
LinkDB
All DBs
Position
B03:43769462..43775620
Genome browser
AA seq
943 aa
AA seq
DB search
MVEAFDDNSNNKLPELKLDTKQAQGFLSFFKTLPNDSRAIRFFDRRDYYTAHGENATFIA
KTYYHTTTVLRQLGSGSDPLSSVSVSRTMFETIARDLLLERTDHTLELYEGSGSNWRLVK
SGTPGNIGSFEDVLFANSEMQDSPVVVALSLNYRENGCTVGLSFVDLTKRVLGMAEFLDD
SHFTNVESALVGLGCKECLLPSESGKSTENRMLCDALTKCGVMLTERKKSEFKTRDLVQD
LGRLVKGSIEPVRDLVSGFEFAPGALGALLSYAELLADESNYGNYTLRRYSLDSYMRLDS
AAMRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLNVNEINLRLDVVQ
AFVEDTVLRQDLRQHLRRISDIERLVHNLQKRRAGLAHIVKLYQSSIRLPYIKSALERYD
GPFSSMMKSRYLEPLELWTDDDHLNKFIGLVEASVDLDQLENREYMISSSYDPTLTKLKE
QQESLEDQIHKLHRQTADDLDLPVDKALKLDKGTQFGHVFRITKKEEPKIRKKLNSQFVV
LETRKDGVKFTNTKLRKLGDQYQQVLEEYKSCQKELVNRVVQTAATFSEVFESLAELISE
LDVLLSFADLASSCPTPYTRPEITSWDEGDIILEGSRHPCVEAQDWVNFIPNDCKLIREK
SWFQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDNASISVRDCIFARVGAGDCQLRG
VSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHIVEIIKAPTLFA
THFHELTALSLENASDDQQKQIVGVANYHVSAHIDASTRKLTMLYKVEPGACDQSFGIHV
AEFANFPESVVALAREKAAELEDFSPSALSLTDTTNEVGSKRKRVYEPDEMSQGVTKARQ
ILEAFVDLPLETMDKMQALQELRKLKDNLEKDAENCRWLQQFL
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggttgaagccttcgacgataatagtaataataagctccctgagctcaaattagacacg
aagcaagcccaaggatttctatcatttttcaaaaccctacctaatgactcgagggccatc
cggttttttgatcgcagggactactatactgctcatggtgaaaatgcaactttcattgcg
aagacctactaccacactactactgtcttgcggcaactgggtagtggatcggatcctctt
tcaagtgtaagtgtcagtaggaccatgtttgaaacaattgctcgtgatcttcttttggag
agaacagaccatacccttgaactctatgagggtagtggttctaactggagattggtcaaa
agtggaacgcctggcaatattggcagttttgaggatgttttgtttgctaacagtgagatg
caggattctccagttgttgttgcattatcacttaactatcgtgaaaatgggtgcactgtt
gggttatcatttgttgatttaactaagagagtacttgggatggctgaattccttgatgac
agtcacttcacgaatgtggagtcggcattagttggtcttggctgcaaagaatgccttctg
cctagtgagagtggcaaatctactgaaaatagaatgctgtgcgatgcgttgactaaatgt
ggtgtgatgttaactgagagaaagaaatctgagtttaaaacccgggatctggtacaggat
cttggaagacttgttaaaggttctattgaaccagttcgagacttagtgtctggatttgag
tttgcacctggggctttgggggcattactatcatatgctgagttacttgcagatgagagc
aattacgggaattatactcttcgtaggtacagtcttgacagttatatgagattagattct
gcagccatgagggcactcaatgttcttgaaagcaaaactgatgcaaacaaaaattttagt
ttgttcggtctaatgaataggacctgtacagctggaatggggaaacggttattgcacatg
tggctaaaacagcccttgttgaatgttaatgaaattaacttgagacttgatgttgtacaa
gcatttgtagaggacactgtgcttcggcaagatctgaggcagcatttaagaagaatatca
gacattgagcggttggtacacaatcttcagaagcggagagctggtcttgcacatattgtt
aaactttatcagtcaagtataagactaccttatatcaaaagcgccctagaaagatacgat
ggaccattttcctcaatgatgaagagcaggtacttggaacctcttgagttgtggacagat
gatgatcacctaaataaattcattgggcttgtagaagcgtctgttgaccttgatcaactg
gagaacagagaatacatgatttcctcaagttatgaccctacactaactaaattgaaggag
cagcaggagtcattagaggatcaaatacataaattgcatagacaaactgctgatgatctt
gatctgcctgtagacaaggcattaaagttagacaaggggacacaatttggacatgttttc
agaatcacaaagaaggaagagcccaaaataaggaagaagcttaattcccagttcgttgta
ctggaaacacgtaaagatggagtgaagtttaccaacacaaagctaagaaaacttggggac
cagtatcaacaggtacttgaggagtacaagagctgtcagaaagagttggttaatagagta
gttcaaactgctgcaacattctcagaggtgtttgaatctttagccgaattgatttctgaa
ctggatgtgttattaagctttgctgatttggcttccagctgcccgacaccctatacaagg
cctgaaatcacttcatgggatgaaggagatattattttagaaggcagcagacacccttgt
gtagaggcacaagactgggtgaattttataccaaatgattgtaagcttatcagagaaaaa
agttggtttcaaataataacagggcctaacatgggtgggaaatcaacattcatccgccag
gtgggagtgaatattttgatggcccaagttggctgctttgttccttgtgataatgccagc
atatctgttcgtgattgcatttttgcccgtgttggtgctggtgactgtcaacttcgagga
gtttctaccttcatgcaagaaatgctcgagactgcatcaatattaaaaggagctacagac
aagtccttgataatcattgatgaattgggacgtgggacatcaacttatgatggatttggt
cttgcttgggccatttgtgagcacattgttgaaataatcaaagcacctactttgtttgca
acccactttcatgaactgactgcattatcccttgaaaatgcaagtgatgatcagcagaag
caaattgttggtgttgcaaactatcatgttagcgcacatattgatgcttcaactcgcaag
ctaactatgctatacaaggttgaaccaggagcttgtgaccaaagttttggtattcatgtt
gccgagtttgcaaattttccagaaagtgttgtagccctagccagagaaaaggcagcagag
ttggaagatttttctccctctgcactatccttaactgacaccacaaatgaggttggttct
aagcgcaagagagtatatgaacccgatgaaatgtcgcaaggcgttacaaaggctcgccaa
atccttgaagcgtttgttgatttgcctttagaaaccatggataaaatgcaagctttgcag
gaactaaggaagttaaaagataatttagagaaggatgctgaaaactgtcgatggctgcaa
caattcttgtag
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