Arachis ipaensis: 107630474
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Entry
107630474 CDS
T04301
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107630474
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107630474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_12
TPR_14
TPR_16
TPR_17
TPR_CcmH_CycH
TPR_6
TPR_11
TPR_7
TPR_9
ANAPC3
TPR_Slam
ARM_TT21_5th
ARM_TT21_C
Fis1_TPR_C
TPR_10
PknG_TPR
HAT_PRP39_C
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
107630474
NCBI-ProteinID:
XP_016189102
LinkDB
All DBs
Position
B03:47733976..47747473
Genome browser
AA seq
1080 aa
AA seq
DB search
MASVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLIIAREYFKQGKIDQFR
QILEEGSSPEIDDYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVEQASAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD
SLELYKRALQVYPDCPAPVRLGIGLCRYKLGQFEKARQAFERVLQLDPENVEALVALAIM
DLRTNEAAGIRKGMVKMQTAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYDKAGVYYMASVKEVNKPHEFVFPYYGLGQVQLKLGDFRS
ALSNFEKVLEVYPDNCETLKALAHIYVQLGQTDKGQDFIRKATKIDPRDAQAFLELGELL
ILSDTGSALDAFKTARTLFKKGGQDVPIELLNNIGVLQFERGEFELAQQTFKEALGDGIW
LFLINGGNKSSNDIATSTLQFKDMQLFHKLESTGHHIDLPWDKVTVLFNLARLLEQLNDS
GTASILYRLILFRFPDYIDAYLRLAAIAKARNNILLSIELVHDALKVNEKCPNALSMLGD
LELKNDDWVKAKETLRAASDATDGKDSYATLALGNWNYFAAVRNEKRNPKLEATHLEKAK
ELYTRVLIQHSANLYAANGAGVVLAEKGHFDVSKDIFTQVQEAASGSVFVQMPDVWINLA
HVYFAQGNFSLAVKMYQNCLRKFFYNTDSQILLYLARTHYEAEQWQDCIKTLLRAIHLAP
SNYTLRFDAGVAMQKFSASTLQKAKRTADEVRATVAELQNAVRVFSQLSAASNLHIHGFD
EKKIDTHVGYCNHLLSAAKVHLEAAEREEQQVRQRQELARQVALAEEARRKAEEQRKFQM
ERRKQEDELKRVQQQEEHFKRVKEQWKSSSHSRRRERTPEEEEGGTGEKRRKKGGKRRKK
DKHSKSHYDNEEGEADMMNEPEMEDEDVDNYREPQTMGNDDAEGNAQDLLAAAGLEDSDA
EDDMAAPSSNIARRRQALSESDDDEPIMRQSSPIRENSADMELSDGEIREPKTNGDDGSD
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggtgtacattccggtgcagaactcggaggaagaggttagggttgcactcgac
caacttcccagggacgcctccgacatcctcgacatcctcaaggccgagcaagcccctctc
gatctctggctcattatcgcgagggagtatttcaagcagggaaaaattgatcaatttcgc
cagattttggaagagggatccagcccggaaatcgatgactactatgctgacgttagatat
gagagaattgctatattaaatgcccttggggcatactatagctaccttgggaaaatcgag
actaaacaaagagaaaaggaggagcatttcattttggcaactcaatattacaataaagca
tcgaggatcgacatgcatgagccctcgacatgggttgggaaaggtcaacttttgcttgca
aagggagaagtagagcaggcatctgctgcatttaagattgtattagatggagaccgagat
aatgttcctgctcttctcggccaggcctgtgttgagttcaaccgagggcggtattctgac
tcacttgagttgtacaagagagcattgcaagtttatcccgattgccctgcacctgttagg
cttggcataggtctatgtcgctacaaattaggtcaatttgaaaaggctcgacaggcattt
gagcgagttttgcagctagatccagaaaatgttgaggctcttgtagcacttgcaataatg
gacttgcgtaccaatgaagctgctggaattagaaagggaatggtaaagatgcagacggca
tttgagatatacccttattgtgcaatggctctgaattatcttgcaaatcattttttcttc
actggtcaacatttcttggttgagcaactgactgaaactgcattagctgtcaccaatcat
ggtccaacaaagtcccattcttattataatttagcgcgctcttaccatagcaagggggac
tatgacaaagcaggggtgtattacatggcatctgtcaaggaagtcaacaagcctcatgaa
tttgtgtttccttattatggtctaggacaagtgcaattaaagttgggagatttcagaagt
gccctgtcaaattttgaaaaggttctggaggtgtacccggataattgcgagacattaaaa
gcactggcacacatatatgttcagcttggtcaaactgacaagggacaggactttattagg
aaagcaacaaaaattgatccccgtgatgcccaggcatttcttgaactgggtgaattgttg
attctgtctgatacaggatctgccctcgatgcatttaaaactgctcgtactctttttaag
aagggaggccaagacgtaccaatagaattactcaataatattggtgtccttcagtttgaa
aggggagagtttgagcttgctcaacaaacttttaaagaggctttgggtgacggcatatgg
ctttttcttattaatgggggaaataagtcttccaatgatattgctacttctacactacag
tttaaggacatgcaattatttcataagcttgaaagtaccggtcatcatatagatttgccc
tgggataaagtcacagtgctctttaacctggccagattacttgagcagttaaatgattct
ggaactgcaagtatattgtatcgcctaatattattcaggtttccagactatattgatgcg
tatctgaggttagctgcaatcgcaaaggctcgaaacaacattctgttaagcattgagctg
gttcatgatgcgctaaaggtgaatgaaaagtgtccaaatgcattatctatgcttggtgat
ttggagttgaaaaatgatgattgggtaaaggcaaaagaaactctcagggcagccagtgat
gcaactgatgggaaggactcatatgctactcttgctcttggaaactggaattactttgca
gcagttcggaatgagaagagaaatccaaagctagaagctactcatttggaaaaggccaag
gaactctatacacgagttctgattcagcattctgcaaatttatatgctgccaatggtgct
ggagtagtgctagctgagaaaggccattttgatgtttcaaaggatatcttcactcaggtt
caagaagctgcaagtggtagtgtttttgtccagatgcctgatgtttggataaatttggcc
catgtttattttgctcagggaaatttttctttggctgtgaaaatgtatcagaattgcttg
cgaaagtttttttataacacagactcgcaaatacttctatatttagctcgtactcattat
gaagcagaacagtggcaagattgtataaaaactctactaagggcaatccatttggcaccc
tcaaactatacattaagatttgacgcaggtgttgcgatgcaaaagttttcagcatcaaca
ttacagaaggcaaaaaggactgcagatgaggtgagagcaactgtagcagaactgcaaaat
gctgttcgagtatttagtcagttgtctgctgcatccaaccttcatattcatgggtttgat
gagaaaaaaattgacactcatgttgggtactgcaaccacctactttcggctgcaaaagtt
catcttgaagcagctgagcgtgaggagcagcaagtgcgacagaggcaagaacttgctcgt
caggttgcattggccgaggaagcccgacggaaggctgaagagcaaaggaaatttcagatg
gaaaggagaaagcaagaggatgaactgaagagggtgcaacaacaggaggaacattttaag
cgtgttaaggaacaatggaagagcagctcacactcaagacgaagggaaaggacaccagaa
gaagaagagggtgggactggcgagaaacggagaaagaaaggtggaaagaggagaaagaag
gataagcactcgaaatcacactatgacaatgaagaaggagaagccgatatgatgaatgaa
ccagagatggaggatgaagatgttgataactacagagagccccaaactatggggaatgat
gatgctgaggggaatgctcaggatcttcttgcagctgctggacttgaagattctgatgca
gaagatgatatggctgcaccatcgtcaaacattgcccgccggaggcaagcgttatcagaa
tctgatgatgatgaaccaataatgcggcaatcaagtcctataagagaaaattctgctgat
atggagctgagtgatggagaaatcagggagcctaagacaaatggagatgatggtagtgac
tag
DBGET
integrated database retrieval system
