Arachis ipaensis: 107631007
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Entry
107631007 CDS
T04301
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107631007
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107631007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
107631007
NCBI-ProteinID:
XP_016189798
LinkDB
All DBs
Position
B03:complement(119872806..119875809)
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AA seq
650 aa
AA seq
DB search
MADLENLLLEAAGRTGNGGRSRHSLPSSRRAQEGSYSDGGSDSREDDSDDELNYGNRKPS
ASQVPLKKRLDPAEREEDMGSQEEQEDDGHSDRPGESSDESNIGDDLYKDEDDRRKLSEM
TELQREMILSDRATKKDDKNLLGKIASKRDIKGKITVPRKQSPPLSSSRMRAAARSADRA
AKNDALNELRAKRLKQQDPEAHRRLREASRVSGSQHFTPPKRKAFTAASLSSSSHSDSES
RSHSDDEGSTGDGGIGDSDDDRALAGSDGLSFQDIKEITIRRSKLARWFMEPFFEELIVG
CFVRVGIGRSKTGPIYRLCMVKNVDASEPDRHYKLENKITHKYLNVVWGNESSAARWQMA
MVSDSGPLEEEFKQWIKEVDRSGGRMPTKQDILDKKQAIQKALTFVYSAATVKQMLQEKK
SATARPLNVAAEKDRLRREMEIAQSKNDETEVERIKKRLQELEASRKSKVKDTKALRLAE
MNRKNRFENFKNASELKPVNTGLRAGEAGYDPFSRRWTRSRNYYASKPGEKAEAGNDSAN
GVVAGAGSNGAAGMVATAAALEAAADAGKLVDTSAPVDQGTSSNVLHNFELPISLALLQK
FGGAQGAQAGFMARKQRIEASVGFRVLENDGRRHALTLTVSDYKRRRGLL
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atggcggatttagaaaatttgctattggaggctgcaggaagaactggtaatggagggaga
agccgacattctctgccatcgtcgaggagggcgcaagagggttcttattcggatggaggg
agtgattcgagggaagatgattctgatgatgagcttaattatggcaacagaaagccctct
gcatcacaagttcctctgaagaagagattggatccagcagaaagagaggaagatatggga
agtcaagaagaacaagaagatgatggtcacagtgatcgcccaggcgaaagcagtgatgaa
tccaacattggtgatgatctctacaaggatgaagatgatagacgcaagctttctgagatg
actgaacttcaaagagagatgatcttgtcagatagggccaccaaaaaggatgacaagaat
ttattggggaagatagcatccaagcgtgatattaaaggaaagataacagttcctagaaag
caatctccaccgttgtcatcgtcgcgaatgcgagcagcagccagatctgctgacagggca
gccaagaatgatgcattgaatgaattgcgtgctaagagattgaagcagcaagatccagaa
gctcaccgcagattgagggaggcatcaagagtttcaggctcccagcattttactccacca
aagcgcaaagctttcactgcagcaagtctcagcagttcaagccatagtgatagtgaaagt
aggtctcacagtgatgatgaaggttcaactggtgatggaggaatcggtgacagtgatgat
gatagggcgttggcaggttccgatgggctatcatttcaggatataaaggaaataactatt
cgcaggtcgaaacttgcaagatggtttatggagcctttctttgaggagttaatagttggt
tgctttgtaagagttggaattggtagatcaaaaactggacctatctacaggctctgcatg
gtgaaaaatgtcgatgcttcagaaccagatagacactataaattggagaacaaaattacg
cacaagtatttgaatgttgtttgggggaacgaaagttcagctgctaggtggcaaatggct
atggttagtgactctggtccgcttgaagaggagttcaaacagtggattaaggaagttgat
cgaagcggtggccggatgccaacgaaacaagatatcttggacaaaaaacaagccatacaa
aaggccctcacatttgtctactcagctgctactgtgaagcaaatgttacaggagaaaaaa
tcagccacagcaagaccactgaatgttgcggcggagaaggaccggctgaggagggaaatg
gaaatagcacaaagtaagaatgatgaaacggaagtggagaggatcaagaaaaggctgcaa
gaattagaggcatccaggaaatcaaaggtgaaggataccaaggctctgaggctggctgag
atgaacagaaaaaacaggtttgagaatttcaagaatgcttccgagttgaagccggtgaat
acaggattgagagcaggggaggcaggctatgatccgttctcaaggagatggactagatca
aggaactactacgcttcgaaaccaggtgaaaaggctgaggctggaaatgatagtgccaat
ggcgtagtggctggtgcaggtagcaatggagcagcgggcatggtggctactgctgcagcc
ttggaagcggctgctgatgcagggaagttggtggacacaagtgctccggtggatcaaggg
acatcgtcgaatgtgctgcacaattttgagcttccaatctctttagcattgcttcaaaag
tttggtggagctcaaggagctcaggcaggattcatggcaagaaaacaaagaattgaagct
agcgttggatttcgagtcctggaaaatgacggccggaggcatgcgctaacactgacggtg
agcgattacaaaaggaggagaggacttctttga
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