Arachis ipaensis: 107631386
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Entry
107631386 CDS
T04301
Name
(RefSeq) probable rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
107631386
Enzymes [BR:
aip01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
107631386
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
107631386
NCBI-ProteinID:
XP_016190301
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Position
B03:123992027..123998765
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AA seq
679 aa
AA seq
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MTMQLCFFFFFLLLLGASSSDKTTLRKGLRGRNSMQTPSSSDFAVKLNEKSHQQLVVDNG
IVSVTLSIPEGYIIGISYNGIENVLEPQNEDQDRGYFDVVWNEPGKPSTFQRIHGTNFSV
IASDENTVELSFLRTWTTSMEGSNVPINIDIRYILRRGDSGFYSYAIFDRPDEGFPGVEV
DQIRFVYKLLKDRFSYMALSSTRQRTMPTMRDREMGQTLAYPEAVLLTKPSNPQFRGEVD
DKYQYSCENSENNVHGWISLQPDESVGFWMITPSNEFRNGGPIKQDLTSHVGPFTLFMFV
STHYAGKEVTMSFQQGDTYKKVFGPVFLYLNSASISDDPLSLWSDAINQLSKEVKAWPYD
FPLSPDYFPPDQRGTVLGRLLVQDWCVKGGRLQYANNAYVGLALPGDAGSWQKESKGYQF
WTQADSKGYFAIKNVVPGDYNLYAWVPGFLGDYKYNSTIIITPGGVIKLDQLVYSPPRNG
PTIWEIGIPDRTAVEFYVPDPYPTLMNKLYTEQRKDKFRQYGLWERYSDMYPNEDLVFTV
GVNKYNRDWFYAHVTRNMGNKTYEPTTWQIIFEHRNDIIEGNYTLQLALASAADAELQVR
FNDPSVYPAHFGTGPIGGDNAIARHGIHGLHRLYSIDVPSHHFVKGKNIIYLRQSRAINQ
FQGVMYDYIRLERPPNPTN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgactatgcaactctgcttcttcttcttcttcttgttgttgcttggtgcctcctcttct
gataagacaacattaagaaaaggtttaagggggagaaacagcatgcagacaccatcatct
tccgattttgcagtcaagcttaatgaaaaaagccatcagcagttggtggttgataatggc
attgtttcggtaactttgtcaataccggaaggctatatcattggtatatcttataacgga
attgagaatgtacttgaacctcaaaatgaagaccaagatagagggtacttcgatgttgtt
tggaatgaaccaggaaaacccagtacctttcaaagaatccacggaacaaatttttcggtt
atagcttctgacgagaatacggtggagctttcatttttaaggacatggacaacttcgatg
gagggctcaaatgtccccattaatatagacataaggtacattttgcgaagaggtgattca
ggattttattcatatgcaatatttgatcggcctgatgaaggatttccaggtgttgaggtt
gatcaaattagatttgtttataagctcctgaaagataggttcagctatatggctctatct
agtacaagacaaagaaccatgccaacaatgagagacagagaaatgggacaaactctggct
taccctgaagctgttctcttaacgaaaccaagcaaccctcaatttagaggagaggtggat
gacaaataccaatactcatgtgagaacagtgaaaacaacgttcatggatggattagcctt
caacctgatgaatccgtgggtttctggatgattactccttccaatgagttccgcaatggt
ggccccatcaaacaagacctcacttctcacgttggccccttcactcttttcatgtttgtc
agcactcactatgccggcaaagaagtaaccatgtctttccaacaaggcgacacttataaa
aaggtttttggacctgtttttctctatcttaactctgcttcaatctccgatgatcccttg
tctctctggtcagatgctattaaccagctctccaaagaagtcaaagcctggccttacgat
tttccactatcaccagattactttccacccgatcaacgaggaacagtgttaggaagattg
ttagtccaagattggtgtgttaagggtgggagattgcagtatgctaacaatgcttatgtt
ggcctagcattacctggagatgcaggatcatggcagaaagagagcaagggttaccaattt
tggactcaagctgactccaaaggatactttgcaattaaaaatgttgtacctggggattat
aacttgtatgcttgggtacctggctttcttggtgattacaaatataattctacaatcata
ataacaccaggaggagtcatcaaattggatcaacttgtatatagtcctcctagaaatgga
ccaaccatatgggaaattggtatcccagatagaacagccgtagagttctacgtaccagat
ccttaccctactctcatgaacaaattatacactgaacaacgcaaagacaagtttaggcaa
tatgggttgtgggaacgttattctgacatgtatccaaatgaagatcttgttttcactgtt
ggtgtcaacaagtacaatagagattggttttatgcccatgttacaaggaatatggggaat
aagacatacgaaccaacaacgtggcaaattatatttgaacatcgcaatgacataatagaa
gggaactacacactacaattagccctagcatctgctgctgatgctgaacttcaggttcgg
ttcaatgatccaagtgtttatcctgcccactttggaacagggccaataggaggagacaat
gccatagcaagacatggaatccatggattgcataggctgtatagtattgatgtgcctagt
catcattttgtgaaaggaaagaatatcatttatctaagacaatctagagctataaaccaa
tttcaaggagttatgtatgattatatccgtttagaaagaccaccaaatccaaccaattga
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