Arachis ipaensis: 107631497
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Entry
107631497 CDS
T04301
Name
(RefSeq) eukaryotic initiation factor 4A-3
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Pathway
aip03013
Nucleocytoplasmic transport
aip03015
mRNA surveillance pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107631497
09122 Translation
03013 Nucleocytoplasmic transport
107631497
03015 mRNA surveillance pathway
107631497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107631497
03041 Spliceosome [BR:
aip03041
]
107631497
03009 Ribosome biogenesis [BR:
aip03009
]
107631497
03012 Translation factors [BR:
aip03012
]
107631497
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107631497
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107631497
mRNA cycle factors
Stress granule specific factors
107631497
Spliceosome [BR:
aip03041
]
Complex C
Other components
EJC/TREX
107631497
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
90S particles
Helicases
107631497
Translation factors [BR:
aip03012
]
Eukaryotic type
Initiation factors
eIF-4
107631497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
TniB
CMS1
Motif
Other DBs
NCBI-GeneID:
107631497
NCBI-ProteinID:
XP_016190442
LinkDB
All DBs
Position
B03:131909816..131913477
Genome browser
AA seq
412 aa
AA seq
DB search
MAEAVGPSSPAAIAANRRRVTSAPENIDFETTEGVKAIVSFEEMGIKEELLRGIYQYGFE
KPSAIQQRAVMPIIQGRDVIAQAQSGTGKTSMIALTVCQRVETSIREVQALILSPTRELA
AQTEKVILAIGDFINIQAHSCIGGKSVGEDIRKLEHGVHVVSGTPGRVCDMIKRRTLRTR
DIKMLVLDESDEMLSRGFKDQIYDVYRYLPPELQVVLISATLPHEILEMTSKFMTDPVRI
LVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMRN
NNFTVSAMHGDMPQKERDAIMAEFRAGTTRVLITTDVWARGLDVQQVSLVINYDLPNNRE
LYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQIDEMPMNVADLI
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcggtggggccttcatcgccggcggctatcgcggcaaatcgtcgacgcgtg
acgagcgcgccggagaacatcgacttcgagacgacggagggcgtaaaggctatcgtgagt
ttcgaggaaatggggatcaaggaggagctcctccgcgggatctaccagtacggcttcgag
aagccctcggccattcagcaacgcgctgtcatgccaatcatccagggtcgtgacgtcatc
gcccaggcccagtcgggcaccggcaagacctccatgatcgccctcaccgtctgccagcgc
gtcgagacttccattcgcgaggttcaggcgttgatattgtcgccgacgagggagctggcg
gcgcagacggagaaggtgatattggcgattggggatttcataaacattcaggcgcactcg
tgcattggagggaagagcgttggggaagatataaggaagctggagcatggtgttcatgtg
gtgtctggaactcctgggcgggtctgtgacatgatcaaaaggaggactttgcgcaccaga
gatatcaagatgctggttctggatgaatcggacgagatgttaagcagagggtttaaggat
caaatttatgatgtgtataggtatctgccaccagagcttcaggttgtcttgatttctgcc
actctccctcatgaaatactggagatgacaagtaaattcatgacagatcctgtaaggatc
cttgtaaaacgtgatgaattgacactggagggcatcaagcaattctttgttgcagttgaa
cgggaagaatggaagtttgatactctatgtgatctttatgatacccttactatcacgcag
gctgttatattttgtaacactaagcgaaaggtggattggttaactgaaaaaatgcgtaac
aataatttcactgtatcggcaatgcatggagacatgccgcagaaagaaagagatgcaatt
atggcagaatttcgtgctggaactactcgtgtgctaataacaacggatgtctgggcacgt
ggccttgatgtacagcaggtttctctagtcatcaactatgacctcccaaataatcgtgag
ctctacattcatcgaataggccgctctgggcgttttggacgcaagggtgttgcaataaac
tttgtcaagagtgacgatatcaagattttgagagatattgagcaatattatagtactcag
attgatgaaatgccaatgaacgtggctgatcttatataa
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