Arachis ipaensis: 107631561
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Entry
107631561 CDS
T04301
Name
(RefSeq) sm-like protein LSM5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107631561
09123 Folding, sorting and degradation
03018 RNA degradation
107631561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107631561
03041 Spliceosome [BR:
aip03041
]
107631561
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107631561
mRNA degradation factors
5'-3' decay
Lsm complex
107631561
Spliceosome [BR:
aip03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107631561
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF7452
Ntox4
Motif
Other DBs
NCBI-GeneID:
107631561
NCBI-ProteinID:
XP_016190536
LinkDB
All DBs
Position
B03:131179130..131181053
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AA seq
87 aa
AA seq
DB search
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGR
RITKLDQILLNGNNIAILVPGGSPDPE
NT seq
264 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaatccatcacagttgctcccctcagagttgattgatcggtgtataggttca
aagatatgggtgataatgaaaggtgacaaggagcttgttggcactcttagaggctttgat
gtctatgttaacatggtccttgaagatgttactgaatatgagataaccgctgaagggaga
cggataacaaagcttgatcagattttacttaatggaaacaacattgccattttggtccct
ggtggttcacctgatccagaatga
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