Arachis ipaensis: 107631950
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Entry
107631950 CDS
T04301
Name
(RefSeq) Niemann-Pick C1 protein isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
aip
Arachis ipaensis
Pathway
aip04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
107631950
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
107631950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
aip02000
]
107631950
Transporters [BR:
aip02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
107631950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_N
Sterol-sensing
NPC1_MLD
Patched
Folate_rec
Motif
Other DBs
NCBI-GeneID:
107631950
NCBI-ProteinID:
XP_016191044
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Position
B03:complement(134907385..134924439)
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AA seq
1277 aa
AA seq
DB search
MGIDNIITASFASVFQIILLSSSLLLTVALQSTYGYGAMHSEEYCAMYDICGESSDGKVL
NCPYGSPSVKPDDLLSAKIQSLCPTITGNVCCTEQQFDTLRVQVQQAVPILVGCPACLRN
FLNLFCELSCSPNQSLFINVTSISEVNGNKTVDGIDFYVTETFGEGLYDSCKDVKFGTMN
TRAIDFVGAGANSYKEWFAFLGAKVPPGFPGSPYSINFKITIPDSSPMELMNASVYSCND
TSLGCSCGDCPSSPVCSHPEPSPPRKDPCSIRIGSLKVRCVELSMAVLYVVLIFMFFGWV
LLQRRRERRRLGYDAEPLLNDMSDEGSTLISNQKEGTHPEEVQFSFVQGCLSRFYRTYGR
WIARRPTIVLCSSVAMVLLLCLGLLRFEVETRPEKLWVGPGSKAAEEKEFFDSHLAPFYR
IEQLIIATIPESEHEKPPSIITEDNIELLFEIQQKVDGIRANYSTSLVTLSDICLKPLGE
DCATQSILQYFQMDPDNYDNYGGVEHAEYCFQHYTSAETCFSAFKAPLEPTTALGGFFGD
NYSEASAFIITYPVNNAMTKVGDENGKAIAWEKAFIELAKEELLPMVQSRNLTLSFSTES
SIEEELKRESTADVITILVSYIVMFGYISVTLGDTPSHQSSFYLSSKVLLGLSGVLLVVL
SVLGSVGFFSLIGVKSTLIIMEVIPFLVLAVGVDNMCIIVDAVKRQPSDLPIEEQISNAM
GAVGPSITLASLSEILAFAVGSFISMPACRVFSMIAALAVLLDFLLQITAFVALVTLDFL
RAKDSRIDCFPCIKVNSSSAEESEGIREERGGLLTRYMKEVHAPFLGLWGVKILVIAVFI
AFTLASIALCTRIEPGLEQQIALPRDSYLQGYFSNISEYLRVGPPLYFVVKDYNYSLESK
HTNQLCSISQCDSNSLLNEISRASLVPKSSYIAKPAASWLDDFLVWISPEAFSCCRKFVN
GSYCPPDDQPPCCFPDEGPCGLGGVCKDCTTCFRHSDLVNDRPTTAQFREKLPWFLDALP
SADCAKGGHGAYTNSVDLNGFQSGVIQASEFRTYHTPVNRQGDYVNALRAARDFCSRISA
SLKMDIFPYSVFYIFFEQYLDIWKIALINLAVALGAVFVVCLIITSSLWSSAIILLVLVM
IVLDIMGVMAILGIQLNAVSVVNLVMSIGIAVEFCVHIAHAFMVSTGDRSQRAKIALCTM
GASVFSGITLTKLVGVLVLCFATSEIFVVYYFQMYLALVIIGFLHGLVFLPVLLSLFGPP
SRYSVVKGQPEDASSSS
NT seq
3834 nt
NT seq
+upstream
nt +downstream
nt
atgggtatcgacaatatcatcaccgcctcttttgcttctgtgttccagataattttactc
tcttcctctttgcttcttaccgtagccctacagtctacttatggttatggggctatgcac
tctgaggaatactgcgcaatgtatgatatatgcggtgaaagtagcgatggcaaagttctg
aattgcccctatggttccccttctgtaaaacctgatgatctgctgtctgccaaaattcaa
agcttgtgtcccaccatcaccggaaatgtttgctgtacggagcaacagtttgacacacta
agagttcaggttcaacaggctgtaccaattctagtgggctgtccagcgtgcttgaggaac
ttccttaatcttttctgtgaactttcgtgctcccctaatcagagtctattcatcaacgtc
acttctatttctgaggttaatggtaataagactgtggatggcattgatttttatgtaact
gaaacatttggagaaggtctatatgattcatgtaaggatgtaaagtttggaacaatgaat
acaagggccatagattttgttggggcaggagctaacagctataaagagtggtttgcattt
cttggagcaaaagtgcctcctggttttcctggttcaccttattctataaattttaagata
accattcctgactcatcccctatggaacttatgaatgcatctgtctattcatgtaatgac
acctcactcggctgctcttgtggtgattgtccttcgtctcctgtttgctctcatccagaa
ccttctcctcccagaaaggatccctgctcaattagaattgggtctctgaaggtcagatgt
gtggaattgtcaatggctgtcttgtatgttgtattaattttcatgttctttggatgggta
ttgctgcaaaggagaagagaaaggaggagacttggatatgatgcggaacctttgttgaat
gatatgagcgacgaaggaagtaccttaattagcaaccaaaaggaaggaacacatcctgaa
gaggtgcaattttcttttgttcaaggatgcttatccaggttttacaggacttatggaaga
tggatcgccagaaggcctacaattgtgctttgttcgtcagtagcaatggttcttttgctt
tgtttggggctgctccgttttgaggtggagacccggcctgagaagttatgggtaggtcct
gggagtaaggcagccgaagagaaagaattctttgatagccaccttgccccattctacaga
attgaacagctcataatagcgacaatccctgaatctgagcatgagaagcccccgagtatc
atcacagaggataatattgaattgctttttgaaatacagcaaaaggtagatgggattcgt
gcaaattattctacttcattggtaaccctaagtgacatatgcttgaagcctttaggcgag
gactgtgccactcaaagtattttgcagtattttcaaatggatcctgacaattatgacaac
tatggaggtgttgaacatgctgagtattgttttcagcattacacatctgcagaaacatgc
tttagtgcatttaaggctccccttgagccaactactgccttgggagggttttttggagac
aattattccgaggcttctgcatttattatcacataccctgtcaataatgcaatgacaaaa
gttggagatgagaatgggaaagcgatcgcatgggaaaaggcttttattgaactggctaag
gaggaattgttgccaatggtgcagtctcgcaatcttactttgtcattttcaacagaaagt
tcaatagaggaagaattaaagagagaaagcacagcagatgtcataacaatacttgtgagc
tatatcgtaatgtttggttatatatcagtgacattgggagacactccatctcatcaatct
tctttctacctctcatccaaggtattgcttggcctttcgggggttttgcttgttgtgctt
tctgtccttggatccgttggatttttcagtttgattggagtgaaatctacattaatcatc
atggaagtcataccttttcttgttttagctgttggtgtagataacatgtgtataattgta
gatgctgtcaaacggcaaccctcagacttacctatagaagaacaaataagtaatgcaatg
ggggcagttggaccatcgataacattggccagcttatcagagattctagcatttgccgta
ggatcgttcatttctatgccagcatgccgtgttttctcaatgattgcagctttggcggtt
ctactggatttccttctacagattactgcttttgtagctttggttacattagactttttg
agagccaaggatagcaggattgattgcttcccatgcataaaggtgaattcatcctctgcg
gaggagagtgaaggcattagggaggaaagaggtggattgcttacacgatatatgaaggag
gttcatgcaccatttcttggactatggggagttaaaatcttggtcattgctgtatttatt
gcgttcaccttagcaagcattgctctatgcacaaggattgaacctggtcttgagcaacag
attgctcttccacgggattcctaccttcaggggtatttcagtaacatttccgagtacctc
agagttggaccaccactatattttgttgttaaggattataactacagtttggaatcaaaa
catacaaatcagctatgctccattagccaatgtgattcaaattctctgttgaatgagata
tctagggcatcattggtgccaaaatcaagctacattgccaaaccagctgcctcatggctt
gatgatttccttgtatggatatcacctgaagcttttagttgttgtcgaaaattcgtaaat
ggctcttattgtccacctgatgatcagccaccttgctgtttcccagatgaaggaccatgt
gggttgggtggagtgtgcaaagactgtacaacttgtttccgccactcggatttggttaat
gatcgtccaactacagcacagtttagagagaagcttccctggtttcttgatgcactgcca
tcagctgattgtgcaaagggtggtcatggtgcttacaccaacagcgtagatctgaatggc
ttccagagtggtgtcatccaagcttctgagtttcgtacgtatcacacacctgttaataga
caaggtgactatgtgaatgcgcttcgagctgcaagggatttttgctcaagaatttctgct
tctttgaagatggatatatttccatactctgtgttttatatcttctttgaacaataccta
gacatatggaagatagcgctgatcaaccttgctgtagcactaggtgctgtttttgtggtt
tgtctgatcattacatccagcctgtggagttcagcaatcatattgcttgttctggtcatg
atagtcttggacatcatgggtgtaatggcaattcttggtattcaactaaatgcggtttct
gttgttaaccttgttatgtcaatagggattgcagttgagttctgtgtgcatatagcacat
gcattcatggtaagcacgggggataggagccaaagagcaaagatagcattgtgtaccatg
ggggcctctgttttcagtggaataacactcactaaattagttggagttcttgtcctttgc
tttgcaacgtcagaaatatttgtggtttactacttccagatgtatttagccttggttatt
attggctttttgcatggtctcgtgtttctaccagtgctgttgagcttatttggtcctcca
tccagatattcagtcgtgaaggggcagccagaagacgcctcatcctcatcataa
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