Arachis ipaensis: 107632687
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Entry
107632687 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107632687
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107632687
03009 Ribosome biogenesis [BR:
aip03009
]
107632687
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107632687
Spliceosome [BR:
aip03041
]
Complex A
U1 snRNP components
U1 related factors
107632687
Complex B
107632687
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
Pre-60S particles
Helicases
107632687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
SNF2-rel_dom
HAD_Pex22
Motif
Other DBs
NCBI-GeneID:
107632687
NCBI-ProteinID:
XP_016191842
LinkDB
All DBs
Position
B01:105474487..105478642
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AA seq
726 aa
AA seq
DB search
MTFLSKTEPNRTTNTPTLGSEIHGAAKAATTLHRVVLTKTPPNQTKLHSNSNTLLFSLSP
PQTQVSPFVSKLHFKFITLFPFISNSLQFQTLTLASPQMNPYDNRYSDAASYRNRRSDIL
GSGPFMPPPVVGRGASVPYGAPPVPYGAGRGAPNAFGSSSVTSFTPPPGGFNIGRGGGGL
GNGHAGGRKDGGGRYGAGGRGRGGSGRDGGTGRGGGSGFRGGRSHGGGRGGGGGRHGGRS
SKDELNKISLPKQDFKNLVPFEKNFYVESPAVRAMSDQEVMHYRASREITVQGHDVPKPI
RMFHEARFPDYCLEVIENLGFVEPTPIQAQGWPMALKGRDLIGIAETGSGKTLSYLLPAL
VHVSAQPGLSHGDGPIVLVLAPTRELAVQIQEEAQKFAGRANIRSTCIYGGAPKGPQIRD
LQRGVEIVIATPGRLIDMLEAQHTNLQRVTYLVLDEADRMLDMGFEPQIRKIVGQIRPDR
QTLYWSATWPKEVEALARQFLRNAYKVIIGSPELKANQSINQVVEVVTDAEKYNRLIRLL
KEVMDGSRILIFMETKKGCDQITRQLRMDGWPALSIHGDKNQAERDWVLAEFKNGRSPIM
TATDVAARGLDVKDIKCVVNFDFPSSLEDYVHRIGRTGRAGAKGTAYTFFTHANAKYARA
LIKILQDAGQVVSPALSALARSAGSALLGSRGSFRSRGRGGFGGNRGGRSGSNTIPLGSK
RPWHGM
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgacattcctctcaaaaaccgaaccaaaccgcaccacgaacacccctactcttgggtcc
gagattcacggcgcagcaaaggctgcaaccaccctccaccgcgtcgtacttacgaagacg
ccaccaaatcaaaccaaattgcactctaattcaaatacgcttctattctctctctcgccc
ccccaaacccaagtttccccatttgtttccaagttgcacttcaaattcatcacgcttttt
ccattcatctcaaattctctccaatttcaaaccctaaccctagcctctccgcagatgaac
ccctacgataacagatactctgacgccgcttcttatcgcaatcgtcgcagcgatatcctc
ggttctggaccattcatgccgcctcctgttgtaggtcgtggtgcttcggtcccctacggt
gcccctccggtcccttatggtgcaggaagaggagctccgaatgccttcgggtcctcgtcg
gtaacttcctttacgccccctcctggtggtttcaatataggccgaggcggtggtggactt
ggtaatggccatgctggtggcagaaaagacggcggaggtcgttacggtgctggtggaaga
ggtcgcggaggttctggtagagacggcggaactggtagaggcggtggaagcggttttagg
ggaggcagaagtcatggtggtggaagaggaggaggaggtggtagacatggtggacggtca
tcgaaggatgaattgaacaagatttccttgccaaagcaggattttaagaatttggtccct
tttgagaagaatttctacgttgagtcccctgcagtgagggccatgtccgatcaagaagtg
atgcattatcgtgccagtagagaaataacagtgcaaggccatgatgtgccgaaacccatt
cggatgttccatgaggccaggtttcctgattactgccttgaggtgattgaaaacctggga
tttgttgagccgactccaatccaggcccagggttggccgatggctcttaaaggcagagat
ttgattggcattgcggagactggctccggcaaaactttgtcatatctgcttcctgctttg
gtgcatgtcagtgcacaacctggactgtcacatggggatggtcccattgtcttagtttta
gcaccaactagagagttagctgttcaaattcaagaagaagctcagaaattcgcagggcgg
gcaaatattagaagtacatgcatctatggtggtgcaccaaagggaccgcaaattcgtgac
cttcaaaggggtgtagagattgttattgctacaccaggtcgccttatagatatgctggaa
gctcagcacacaaacttgcagagagttacttaccttgtcttggatgaagctgataggatg
ttggacatgggttttgaacctcagataaggaaaattgtaggccagattcgaccagataga
cagacgttatattggagtgctacatggccaaaggaggttgaagctctggcaaggcagttc
ctgcgcaacgcatataaggtaattattgggtcaccagaactgaaagcaaaccaatctata
aatcaagttgttgaagttgtgacagatgcagagaaatataacagattgattagattgctg
aaagaagtgatggatgggagccgaattctaatatttatggagacaaaaaagggatgtgat
caaattacaagacaattgaggatggatggatggccagctctatccatccatggtgataaa
aaccaagctgaaagagactgggttttggctgagtttaagaatggtagaagtccaataatg
actgccactgatgttgctgcacggggtcttgatgtgaaagacataaaatgtgtggtcaat
tttgattttccttcaagcctggaagattatgtacacagaattggtcgaactggtcgtgca
ggggctaaagggactgcgtacaccttcttcacgcatgctaatgctaagtatgcgagggct
ctgataaagattttacaagatgcaggtcaggttgtgagccctgcactatctgcattggct
cggtcagctggttctgctctattaggatccagaggaagctttcgatcaagaggacgtgga
ggctttggtggcaacagaggtggaagatcaggatccaataccattcctctaggttcaaag
aggccttggcatggtatgtag
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