Arachis ipaensis: 107638678
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Entry
107638678 CDS
T04301
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like isoform X2
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
aip
Arachis ipaensis
Pathway
aip03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107638678
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107638678
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
107638678
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
Motif
Other DBs
NCBI-GeneID:
107638678
NCBI-ProteinID:
XP_016197520
LinkDB
All DBs
Position
B04:complement(6862551..6883892)
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AA seq
557 aa
AA seq
DB search
MSADLVLKPSCGGCGSTTDLYGSNCKHMTLCLNCGKAMAQKRAKCHDCGATLTRLIREYN
VRSSSSSDKNYFIGRFMSGLPDFSKKKSAENKWSLQKDGLQNRQITDSLREKYKNKPWLL
EDETGQSQYQGHLEGAQSSSYYLLMLEKKEFSAIPSGSWYNFNKVAQYKQLTLEEAEEKI
RNRKKTADGYQRWMMKAANNGPAAFGEHGKLDDKESNTGGGGGRSRKKTSEDDEGQASDK
GEEDEDEEAERKNRLGLNKRDGDDDDEEGLRGGDLDLDDDDIEKGDDWEHEEIFTDDDEA
VGNDPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGKGLSKSGKELKELLGRASGMNESDA
EEEEDDDDDDDMDDEVNIPPVTATKQKDAPKPKEEPVDNSPSKPAAAGATRGAPSTSKSS
KAKRKTIEESKPSNAATPKKVKSENEQKSSGKDVHGTASKSNASAKGSAPPLPSSSSSKV
GTSTAASGPVSEEEIRAVLKQKTRVTTQYLVAKFKARLRCREDKYAFAEILKRISKIQRT
PTSNRSSYVTYVILRDK
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcagacctcgttctgaaaccgtcttgcggcggttgtggatcgacgactgacctt
tacggaagcaactgcaagcacatgactctctgcttgaactgcggcaaggccatggcacag
aaacgcgctaagtgccacgattgtggcgccaccctcactcgcttgattcgagaatataat
gttcgttcgagttctagcagtgacaaaaactactttattgggagattcatgtctgggttg
ccagatttttcgaagaaaaaaagcgccgagaacaagtggtctttgcagaaagacgggctc
cagaaccgccaaattactgattctttgagggaaaagtacaagaacaagccttggctcctt
gaggatgaaactggtcaatcccagtaccagggtcatctagagggtgcacaatcatcttca
tattacctgcttatgctggaaaagaaggagttttctgccatcccctctggttcttggtac
aactttaacaaggttgcacagtacaagcaattgactttggaggaagcagaagagaagata
aggaatagaaagaaaactgcagatggatatcaaagatggatgatgaaagcagcaaataat
gggcctgctgcattcggggaacatgggaagttagatgacaaggaaagcaacacaggcggt
ggtggaggaagaagccgtaaaaaaactagcgaggatgatgaaggtcaagcctcagataaa
ggggaggaggacgaagatgaggaagcagaaagaaagaatagacttggacttaataaaaga
gatggtgatgatgatgatgaagaaggtctaaggggtggagaccttgatctagatgatgat
gatattgagaagggtgatgattgggagcatgaagagattttcactgatgatgatgaagct
gtaggcaatgatcccgaggaaagggaagatttggctcctgaagttcctgctcctcctgaa
atcaagcaggatgaagaggaagaagacgaagataatgaagaggggaaaggtctgagtaaa
tctgggaaagagctgaaggagttgctagggcgagcaagtggtatgaatgaatctgatgcg
gaggaggaggaggatgatgacgacgacgatgatatggatgatgaggtcaacattcctcct
gtgacagctacaaagcagaaggatgcacctaaacctaaggaagaacctgttgacaacagc
ccttcaaaaccagctgcagcaggggcaactcggggagcaccttctacttcgaagtcttca
aaggcaaagagaaaaacaatcgaggaatcaaaaccatcgaatgctgcaacaccaaagaag
gttaagtccgaaaatgaacaaaagtcatccggtaaagatgtacacgggactgcttctaaa
agtaatgcatctgcaaaaggttcggccccaccactgccatcatcatcatcgtcaaaagtt
gggacttccactgcagcttctggacctgtgagtgaagaagaaatcagagctgtgttaaag
caaaagactcgagtgaccacacagtatcttgtagctaaatttaaggcaagactaagatgt
agagaggataagtatgcatttgcagagatcctgaaaagaatatctaaaatacagagaact
ccaacttcaaatagatccagttatgtaacttatgttatcctgagagataagtga
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