Arachis ipaensis: 107638730
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Entry
107638730 CDS
T04301
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107638730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107638730
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107638730
mRNA degradation factors
5'-3' decay
Decapping complex
107638730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EDC4_C
Ge1_WD40
WD40_WDHD1_1st
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_TEP1_2nd
WDR55
Beta-prop_HPS5
Beta-prop_EDC4L
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML_2
Beta-prop_Vps41
GerPC
Motif
Other DBs
NCBI-GeneID:
107638730
NCBI-ProteinID:
XP_016197580
LinkDB
All DBs
Position
B04:complement(7945141..7954178)
Genome browser
AA seq
1445 aa
AA seq
DB search
MASSPGNPNQQQQSNHFDLQKLFKGTTPPTPNPSSSPSSSSNLNSSPSFPAPSPSTPPPS
SYPTPSSSYPPPTGTYPYHLQFPHFLPPYPNLQHFQQQQQQQEHPFVLHHQQQQQQQQLP
QMISPQRPIFQQQQSSSSPSPSPSSPSPHVPTSPNSGARLMAMLGTQNPQSNQEQSVMNQ
SPSSIASTSQSSASASAPPIPMVSDFLMPGTSNHPAAVLLPSSGSQPPQASPAGVVSPQG
STPMRMLSSKLPKGRHLIGENVVYDIDVRLPGEVQPQLEVTPITKYASDPGLVLGRQIAV
NRSYICYGLKLGAIRVLNINTALRYLLRGHTQRVTDMAFFAEDLHLLASASTDGRIFVWK
INEGPDEEDKPQITGKVITAIQITGESDSVHPRVCWHPHKQEILMVAIGNRILKIDTMKA
GKGENFSAEEPLKCSIDKLIDGVQLVGKHDGNVTELSMCQWMKSRLASASADGTVKIWEE
RKATPLAVIRPHDGKPVNSVTFLTAPHRPDHIILITAGPLNQEVKIWVSDNEEGWLLPSD
SESWTCIQTLDIRSSYETNPEDAFFNQVVALPRAGLFLLANAKKNTIYAVHIEYGANPTA
TRMDYIAEFTVTMPILSLTGTSDMLPDGEHIVQVYCVQTQAIQQYALNLSQCLPPPLDNV
EVEKTESNLSRGVDALDASANMETANVPQVNPSSSESAPVVSAPVSLPSSDISGLPEAST
SDTETKENDLSSNNGFDHINASAPPLPLSPRLSHKLSGLKGSSNNLETISTSADHSFEQP
NSDPSAERRIESEKDNTADVPASGDSSLKNDRAIQNDVSAVSNAPTAFKHPTHLVTPSEI
FSKATLSSENSLTSQGMNVKDVAAHSDTENLEVEVKVVGETGLNQENTEYDRDRDSYTNV
AERKEKLFYSQASDLGIQMARDSYNIEGVRPADNIKTIDAPDQSRSSIEEEVHEASKDVS
ANDGESETVAATSQSPAPAMKSKKQKGKGSQVSGTSSANPSPFNPMDSSNDQGDNSGGSS
IEAALPQLSAMQDMLSQLLGMHKELQKQMNVTVSIPVTKEGRRLEGSLGRSMEKVVKSNT
DALWARLQEEHAKQEKLERERTQQITNLISNFVNKDMAAVLEKIVKKEISSIGPTVTRSI
SQIIEKAVSSAVAESFQKGVGDKALNQLEKSVTSKLEATVARQIQAQFQTSGKQALQEAL
RGSLEASIIPAFEMSCKAMFEQIDASFQNGLAKHTAAIQQQYDTTHSPLAITLRDTINSA
SSITRTLSGQLAEGQRKLLAMAGNSTASADPFVTQISSGLHEVVAEDPTKELSRLVSEGK
FEEAFTGALHRSDVSIVSWLCSQVDLTAILSMVPLPLSQGVLLSLLQQLSCDLGTDTPRK
VSWMTDVAASINPTDPRIAAHARRILDQVSRTLNHHRNLSTTSPSEASSMRLLMHVINSV
LLSCK
NT seq
4338 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttcacctgggaatccaaatcaacagcagcaaagtaaccattttgatttgcag
aaactattcaaaggaacaacaccaccaaccccaaatccttcttcttctccttcttcttct
tcaaacttgaactcttcaccatcattcccagctccttcaccttcaacacctcctccttct
tcataccctacaccttcttcttcttaccctccacccactggcacatacccttatcacctc
caatttcctcactttcttcctccttatccaaatctccaacacttccaacaacagcaacag
caacaagaacacccttttgttcttcaccatcagcagcagcagcagcagcagcagcttcct
caaatgatttctcctcaaagaccaatttttcagcagcaacaatcttcatcatcaccttca
ccttctccttcatcaccatcaccacatgttcctacatctcctaatagtggtgctcgcctt
atggccatgttaggcacccaaaaccctcaatccaatcaagaacaatcagtcatgaatcaa
tcaccatcatcaatagcatcaacatcacagtcttctgcatcagcatcagcaccaccaatt
cctatggtttctgatttcttaatgcctggcacttcaaaccaccctgctgcagtgttgttg
ccctcatccgggtcgcagccgccgcaggcttcgccggccggtgtggtgagccctcagggc
agcaccccaatgaggatgctgagcagtaaactcccaaaggggagacatttgattggagag
aatgttgtttatgacattgatgttaggttgccaggggaagtgcagcctcagcttgaggtc
actcccatcactaagtatgcctctgatcctggccttgttctcggccgccaaatcgcggtg
aataggtcttacatatgctatggactcaagcttggtgccatcagagtccttaatattaat
actgcattgagatatttgcttcggggtcatactcagagagtaacagacatggctttcttt
gctgaggatctacacctgttggccagcgcaagcactgatgggagaatttttgtttggaag
attaatgagggtcccgatgaggaagacaaacctcaaattactggtaaagtgatcacagcc
attcaaataacaggggagagtgactcagttcatccacgagtatgctggcatcctcacaaa
caagagattttaatggttgctattggaaaccgtatcctcaaaattgacactatgaaagcc
ggaaaaggtgaaaatttttctgcggaagagcctctcaaatgttcaattgataagttgatt
gatggggtgcagcttgttggtaagcatgacggcaatgtcactgagttgtcaatgtgccaa
tggatgaagagtcggttagcttcagcatcggcagatggcacggtgaagatatgggaagaa
cgtaaggcaacaccacttgctgttataagaccacacgatggtaaaccggttaattctgtg
acattcttgactgcccctcaccgccctgatcacatcattcttatcacagcggggccacta
aatcaggaagtgaagatatgggtgtctgacaatgaggaaggctggttattgcctagtgat
tccgagtcatggacttgtattcaaactttggatataagaagttcttatgaaactaacccc
gaggatgcattctttaatcaagttgtagcactgccgcgagctggtttgtttctgctagca
aatgccaagaaaaatacaatatatgctgtacatatagagtatggagcgaatccaactgct
actcgtatggattacattgctgaattcacggtcacaatgcctatactaagtcttacagga
actagtgacatgttacctgatggtgagcatattgtacaggtgtattgtgtccaaactcaa
gctatacaacaatatgcgctcaatttgtcacaatgcttgcctccgccattggataatgtt
gaagttgagaaaacagaatctaatctatcacgtggtgttgatgctttggatgcgtctgct
aatatggaaactgcaaatgtgccacaagttaatcctagcagctctgaaagtgctcctgtt
gtaagtgctcctgtaagcttgccttcttcagatatttctggtctgcctgaagcatctact
tcagataccgaaaccaaggaaaatgatttgtcttctaataatggctttgatcatattaat
gcttcggcacctccacttcctctgagcccaagattgtcccataagttatcaggtttgaaa
ggttcatcaaataatttagaaactatttcaaccagtgcagatcacagttttgagcagcca
aattccgatccttcggctgaacggagaatagagtctgagaaagataatacagctgatgtg
cctgcgtcgggtgacagttctttgaagaatgatagagccatacaaaatgatgtctctgcg
gtttctaatgccccaacagcatttaaacacccgactcatctggtaaccccatctgagatt
ttctcgaaagctacattatcttctgagaattcactaacttcccaagggatgaatgtgaag
gatgttgctgcccatagcgacacagaaaaccttgaagtagaggttaaagtggtaggtgag
actggtttaaatcaagaaaatactgaatatgacagagacagagattcttacaccaatgtt
gccgagaggaaagagaagttattctactctcaagcgtctgatttgggcattcagatggcc
agagattcatataacattgagggagtacgtccagctgataatattaagacgattgatgca
cctgatcaaagccgtagctctattgaggaagaagttcatgaagcgagtaaggatgtatct
gcaaatgatggtgaatcagaaactgtggctgctacttcacaatctccagcacctgccatg
aaaagtaaaaaacaaaaaggcaaaggttctcaagtgtccggtacatcatctgctaacccc
agccctttcaacccgatggattcatcaaatgaccaaggtgacaattcaggaggctcatcc
attgaagcggctctaccacagttatccgctatgcaggatatgctgagccagttattaggc
atgcataaggaattgcaaaagcagatgaatgtgacggtttccatcccagttacgaaggaa
ggcagaagattagaaggatccttgggccggagcatggagaaagttgtcaagtccaacacg
gacgccttatgggctcgcttgcaagaagaacatgcaaagcaagagaagttagagagagaa
cgtacacagcagataacaaacttgatctccaattttgtgaacaaggatatggcagctgta
ttggagaaaatcgttaagaaggaaatatcctcaattgggccaactgtcactcgttcaatt
agtcaaattatagagaaagcagtatcatcagctgttgcagagtcattccagaagggggtg
ggagacaaggcattgaatcaactagaaaaatcagttacttcaaaacttgaagctacagta
gctaggcagatacaagcacaatttcaaacttctggcaagcaagctcttcaagaagcactt
aggggtagtttggaagcttcaattattccagcatttgagatgtcttgcaaagccatgttt
gagcaaattgatgcctcatttcagaatggtcttgcaaagcacacagctgctattcagcag
cagtatgatactactcattctcctctagccataactttgagggatacaattaattcagcg
tcatcaatcactcgcactttgagcgggcaattggccgagggccagcggaaactgctagca
atggcaggtaactccacggcatctgcggacccctttgtaacgcaaatcagcagcggttta
catgaggtggtggctgaggatcctaccaaggaactatcaaggttggtgagtgagggcaag
ttcgaggaagcatttaccggagcgcttcatagaagtgatgtttcaatcgtttcgtggcta
tgttctcaggttgatttaactgcaatcttgtcaatggtaccacttccattaagccaagga
gtacttctgtccctactgcagcaactgtcctgtgacctgggaaccgatacaccaagaaaa
gtgtcctggatgacagatgtggctgcgtctataaaccctaccgatccaaggatcgcagca
catgcccggcggatattggatcaagtgtcccggacgctaaaccaccaccggaatttgtca
acgacctccccttcggaagcaagctcgatgcgccttctaatgcatgtcataaattctgtg
ttattgagctgtaaatga
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integrated database retrieval system
