KEGG   Arachis ipaensis: 107638736
Entry
107638736         CDS       T04301                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
aip  Arachis ipaensis
Pathway
aip03020  RNA polymerase
aip03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    107638736
  09124 Replication and repair
   03420 Nucleotide excision repair
    107638736
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aip03021]
    107638736
   03400 DNA repair and recombination proteins [BR:aip03400]
    107638736
Transcription machinery [BR:aip03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     107638736
DNA repair and recombination proteins [BR:aip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      107638736
SSDB
Motif
Pfam: RNA_pol_Rpb4
Other DBs
NCBI-GeneID: 107638736
NCBI-ProteinID: XP_016197584
LinkDB
Position
B04:complement(8071037..8074153)
AA seq 206 aa
MSEKGGKGSSLLSKGSLKGKDDSATKSSKGRRVQFSKEGPFESGITSTGSPASGGKGEFN
KGGKGDKVANGKANASKSPSDPGIDQKLPENIKCLMDCEAADILHGIQEQMVMLSRDSTI
KIPISFDKGLHYASSNSKYSDSESVRRVLQPLKGQGFSDNEICMIANMCPETVDEVFALV
PSVKDKGSTSQVLQDSLHQLSKLKQF
NT seq 621 nt   +upstreamnt  +downstreamnt
atgtcggagaaaggaggaaagggttcatcgctgttaagcaagggatccctaaaagggaaa
gatgacagtgcaacaaaatcatcaaaaggaaggagggttcagttttctaaagaaggccca
tttgaatccggaataactagtactggttcgccagcatctggcggaaaaggtgaatttaac
aaaggaggaaagggagacaaggttgcaaatggaaaggctaatgcttcaaaaagcccatca
gaccctggaattgatcaaaaacttccagaaaatatcaaatgcctaatggactgtgaggct
gctgatatcttgcatggcattcaagagcagatggtcatgttatctagagattcaaccatc
aaaatccctatatcatttgacaaggggctgcattatgccagtagtaatagcaagtactca
gattctgagtcggttagacgtgtacttcagccacttaagggtcagggcttctctgataat
gagatatgcatgattgctaatatgtgcccagaaactgttgatgaagtttttgcgcttgtc
ccatcggtaaaggataagggaagcactagccaagttcttcaagattcattgcatcagctt
tctaagcttaaacagttttaa

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