Arachis ipaensis: 107639159
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Entry
107639159 CDS
T04301
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107639159
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
107639159
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
MOEP19
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
107639159
NCBI-ProteinID:
XP_016198079
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All DBs
Position
B04:27986076..27991936
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AA seq
472 aa
AA seq
DB search
MATAQNGTVTATTITDANNSTQEPATALGATTPAEKRWPGWPGECVFRLIVPMGKVGSII
GRKGELVKKTCEDTRARIRVLDAPLGTPDRVVLITGKEEPEAALSPAMDATIRIFKRISG
LSETDSDNKGSAGVVFCSIRLLVASTQAVNLIGKQGSLIKSMQESSGASIRVLSADETQF
HAATTDERIVELQGEALKVLKALEAVVSHLRRFLVDHSVLPLFEKPYTAPTTQPHQAETL
ADKSLHIASQTSIFSDISLPTKRDSVFADRGSLLDSLLPSSTVSVYGQDSSLSAVRSSAL
TPLSRAAAPIVSTVVQTMQIPLSYAEDIIGVQGTNIEYIRRTSGAILTVQESRVPDEIVV
EIKGSSSQVQTAEQLIQEVISNHKDPVASSYGRVDAGLRSSYAAVGETGLGSSYSTVGDT
GLRSSYATLGDVGLRNSYSTVGTASRPAPSLTSQPYSGYGASSLGDYSTFRL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggccactgcccaaaacggcaccgtcacagcaaccaccatcaccgacgcaaacaattcg
actcaggaaccggccaccgccctcggagccacgactccggcggagaagagatggcctggt
tggcctggggagtgcgtgttccggctgatcgtgccgatgggcaaggtcggcagcatcatc
ggtcgcaagggtgagctcgtcaagaagacctgcgaagacacacgcgcccgcattcgcgtc
ctcgacgcccctctcggcactcccgatcgagttgtactgataactgggaaggaagagcca
gaggcagctctttcccctgcaatggatgctacgataagaatatttaagcgtatctctggg
ttatctgaaactgacagtgacaacaaaggatctgccggggttgtattttgttccatccgc
ttgttggtggcatcaacacaagctgtcaatttgattggaaaacaaggatcgttaatcaaa
tctatgcaggagagtagtggtgcttctattagggtattgtcagcagatgagacgcaattt
catgctgctaccacggatgagaggattgtggaacttcagggagaagccttgaaggtcctt
aaagctctggaagcagtggttagccacctaagaaggtttttggttgatcatagtgttctt
cctctatttgagaaaccttacaccgccccaaccactcaaccccatcaagcagagaccttg
gccgacaagtcattgcatattgcttctcaaactagcattttttcagatatttctcttcca
acgaaaagggattctgtctttgctgatcgtggaagtcttttggactcgttacttccttcc
tccactgtgtctgtctacgggcaagattcttcactttctgctgttcgatcttcagcactt
actccacttagtcgtgctgctgctcctattgttagtacggtagtacaaaccatgcaaata
ccattgtcatacgcggaggacatcattggtgttcaagggactaatattgaatacattcgt
cgaactagtggagccatattgactgtgcaggagagcagggtgcctgatgaaatcgttgtg
gaaataaaaggctcctcatctcaagttcagacggcagagcaattgattcaggaagtgata
agcaaccacaaagatcctgttgcaagcagttatggaagagtagatgcaggtttgaggtct
tcgtacgcagcagtgggcgagacaggtttggggtcttcatactctacggtgggcgacaca
ggtttgaggtcttcatacgctacactgggcgatgtaggtttgaggaattcatactctacg
gtgggcactgcgtcacgccctgcaccgtccttgacttcacaaccttactcaggttatgga
gcttctagtttaggagactatagtactttcagactttaa
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