Arachis ipaensis: 107639564
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Entry
107639564 CDS
T04301
Name
(RefSeq) ribosomal RNA small subunit methyltransferase nep-1 isoform X1
KO
K14568
rRNA small subunit pseudouridine methyltransferase Nep1 [EC:
2.1.1.260
]
Organism
aip
Arachis ipaensis
Pathway
aip03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107639564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aip03009
]
107639564
Enzymes [BR:
aip01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.260 rRNA small subunit pseudouridine methyltransferase Nep1
107639564
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
90S particles
Other 90S particles
107639564
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EMG1
Motif
Other DBs
NCBI-GeneID:
107639564
NCBI-ProteinID:
XP_020977075
LinkDB
All DBs
Position
B04:complement(101779276..101783867)
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AA seq
259 aa
AA seq
DB search
MLTPSANSRLKRKMLETQTQCSEEKEEPRELDSKIGKVDRVLGSPQDPNVRSGAIFILEN
ASLKKGLVKKEWKILNSHDDANLLLKQNKSLNDYRPDIVFEALRSVIDSPLNKYGLVEAI
FVKIDGGALFEIKPHVRIPRTCKRFCGLIVDLLRKSRVCAKDTNEVLIRVVEEPVMRHLP
VNSHIVGLSYNSKKVVHIDDYVSSLSDHMTPVFVVGAMVNGKVKEDHTHDYISVSDYPLG
AKCCVGLICDALEQKWKLF
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgctcactccaagtgcaaacagtaggctgaagcgtaagatgcttgagacacaaacccaa
tgcagtgaagagaaagaagagcctagagaacttgatagtaaaattggaaaagttgatagg
gtgcttggttctccacaggatcctaatgttaggtcgggtgccatatttatattggaaaat
gcttcgctgaagaaaggactcgttaaaaaggagtggaaaatcctcaattcacatgatgat
gccaatcttctgttgaagcaaaataagagtcttaatgattatcgaccagacattgttttt
gaggcactccgtagtgttattgatagtccacttaataaatatggtttggtggaagctata
tttgtgaaaattgatggaggagccctatttgaaatcaagccacatgttcgcattcctcga
acttgtaaacgtttctgtggtctcatagtggatttgcttagaaagtctcgtgtttgtgct
aaagatacaaatgaagtacttattcgtgttgttgaagagcctgtaatgcgccatttacca
gtcaattctcatatagtaggcctctcttataattcaaagaaggtggtccacatagatgac
tatgtttcttccctaagtgatcatatgacgcctgtttttgtggtgggtgcaatggtaaat
gggaaagtaaaagaagaccacacacatgattatatttctgtttctgattatccacttggt
gctaaatgctgcgtaggccttatctgtgatgcattggagcaaaaatggaagctattctga
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