Arachis ipaensis: 107640873
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Entry
107640873 CDS
T04301
Name
(RefSeq) dicer-like protein 4
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
aip03036
]
107640873
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107640873
microRNA pathway
RISC loading complex
107640873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
DEAD
ResIII
dsrm
DND1_DSRM
PAZ
Cas3-like_C_2
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
107640873
NCBI-ProteinID:
XP_020961744
LinkDB
All DBs
Position
B01:134640407..134652310
Genome browser
AA seq
1634 aa
AA seq
DB search
MPDGESSSATSSAELEPHLSVAEYLLQNLSLSEVKDHDDQAVKKDPKKIARRYQLELCKK
ALEENIIVYLGTGCGKTHIAVLLMHAMGHLIRKPQKNICIFLAPTVALVHQQGKVIEDST
DFKVGIFCGSSKRLKRHHDWEQEIGQHEVLVMTPQILLHNLSHCFIRMDMISLLIFDECH
HAQVKSNHPYAEIMKVFYKNNSKSVPRIFGMTASPVVGKGASSEANLSKSINSLEQILDA
KVYTVEDRELQSFVTNATISVYHYSSVANGTDSLYTTYHADLDLIKYQCIASLGRNVEDH
QKRMNTKKLLNRIHENVVFCLRNLGIWGGLQASHILLRGDRSERHELVEAEGNSSDDSVC
DKYLSQAAELFNSHLKGDGVSDLSSMEIMREPFFSSKLLCLVQILSSFRMQQNPKCIIFV
NRIVTARSLSYILKKLKLLTQWRSDFLVGVHAGLKSMSRKTMNIIVEKFRSGELNLLVAT
KVGEEGLDIQTCCLVIRFDLPETVASFIQSRGRARMPQSEYAFLVDSDNKKDLDLIDGFE
KDECRMNMEIADRTSTETYIIPEERIFRVDSSGASVSSGYSISLLHQYCSKLPHDEYFDP
KPSFYYFDEKDGIVCHIIFPSNAPIHLIVSSPQLSMEASKKDACLKAIQELYEIGSLSDC
LLPKQETTEPEEKDSSPSNTDGCEEDNSRGELHQMLVPSPFRKSWINEEKIVHLNSYYIK
FCPSPEDRVYKKFGLFIMTCLPAEAEKLELDLHLAHGRSVMTSFVPFGVVEFDKDEIKMA
ERFQEMFLKIILDRSEFVSDLVTLGKGAESHNGSSTFYLMLPVVLQEYENIMTVDWKTVR
RCLCSPIFKPPPDAVYQKPYPSDSSLQLANGKRSIRDVENSLVYAKHKKLFYFVTNVNRE
KNGLSPSKDSGTSSYADDLLEKFSIHLKHPEQRLLHAKPVFNLHNLLHNRKYEDTEPQEL
EEFFVDLPPELCELKVVGFSKDMGSSISLLPSVMHRLGNLLVAIELKQMLSRFFPEAAEI
NSHTILEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLTCDSLHEGDLTARRSNVVN
NSNLYKLALKRNLQVYIRDQAFDPCQFYAFGRPCPIVCNNETEESIHSCLNSVKEQGSST
EIQCNKNHHWVYRKTIADAVEALVGAFIVDSGFKAAIAFLTWLGIQVSFEASQLINVCRG
SVGYVPLSADVNILSLEDKLGYHFIHKGLLLQAFVHPSYNKHGGGCYQRLEFLGDAVLDF
LITSYLYSAYPKLKPGQLTDLRSLSVNNKAFACVAVDRSFDKFLLCDSSNLSEAVKKYVA
YIRRPSSSNVNEGPKCPKALGDLVESCVGAILLDSGFNLYKVWEIMTSFLDPIMKFSSNL
QLSPKRDLQELCQSHNLELQLQASKLTKMFSVEAKVIVNGTCQTAVATGQSKKEATRIAS
QKLFSELKAQGWRPRSKPLEEVLKSTFKGEAKLIGYNETPIDVTAINSIEHSTVNGNLSS
SNSNPIIRPLREVIGIKPVDQKVQHSSKGQRSGTYDNRDCAGDLSRTGTARSRLYEFCAA
SCWKPPTFECVYEGGPDHMKLFTYKVTLDIEESPDVIYEFIGEPKPKKKDAAESTAEGVF
WYLERAGYLPNKRN
NT seq
4905 nt
NT seq
+upstream
nt +downstream
nt
atgccggacggagaatcctcttccgccacgtcatcggcggagctggagccccatttaagc
gtcgctgaatacttgctgcagaaccttagtctctctgaagtcaaagatcatgacgaccaa
gctgttaagaaagaccccaaaaaaattgccagaaggtaccagttggagctgtgcaaaaaa
gcattagaagaaaatataattgtatatttggggacaggttgtgggaagacccacattgct
gtgctgcttatgcatgcgatgggtcatttgataaggaagccccagaaaaatatatgtatt
tttcttgcccctactgtggcgcttgttcatcagcaagggaaggttatagaagactctact
gattttaaggttgggattttctgtgggagctccaagcgcttgaaacgtcatcatgattgg
gagcaggaaattggacagcatgaggttcttgtcatgaccccgcagatattattgcacaac
ttatctcattgtttcattaggatggacatgatttcacttttgatatttgatgaatgtcat
catgctcaagtcaaaagcaaccatccttatgcagaaatcatgaaagtcttctacaaaaat
aattccaaaagtgttccccgtatttttggcatgactgcttccccagtcgtaggaaaaggg
gcttccagtgaagcaaatctatcaaaaagcatcaatagtcttgaacaaatacttgatgct
aaggtatacacagttgaagacagggaattgcaatcttttgtgaccaatgcaacaatttct
gtatatcattatagctcagttgcaaatggaacagatagcttgtatacaacttaccatgca
gatcttgatctgatcaaatatcagtgcatagcaagcctcggtaggaatgtagaagatcac
cagaaacggatgaacacaaaaaaacttctaaacaggatacatgagaatgttgttttctgt
ctgaggaatcttggcatttggggaggactgcaagctagtcatattcttttgaggggcgat
cgttccgagaggcatgaattagtggaggcagaaggaaattcaagtgatgactctgtgtgt
gataaatatctatctcaggcagctgaactctttaactcacatctgaaaggtgacggtgta
tctgatttatcttctatggaaataatgagagagccctttttctcatcaaaacttttgtgc
ctcgttcagatactgtcctcctttaggatgcaacagaacccaaaatgtatcatttttgtt
aatagaatcgtgactgcaagatccctgtcatacatacttaagaagctgaaacttctaaca
caatggaggagtgattttctagtaggagtccatgctggattgaagagtatgtcacgcaag
accatgaacatcattgttgagaagtttcgctctggtgagttgaatctattggttgcaaca
aaagtgggtgaagaaggacttgacattcaaacttgctgccttgtgatacggtttgatctt
cctgaaactgttgccagctttatacagtcaagaggccgtgcacgtatgcctcagtcagaa
tatgcatttttggtggacagtgacaataagaaggatctcgatttaattgatggttttgag
aaagatgaatgccgcatgaatatggaaattgctgaccgtacatcaactgagacatacata
atccctgaggaaagaatattcagagtagattcatccggtgcttctgtcagttctggatat
agtatttcattacttcaccagtattgttcaaagcttccacatgatgagtactttgacccc
aagccaagcttttattactttgatgaaaaagatgggatagtctgccacataatatttcca
tccaatgcaccaatacacttaattgtcagttcaccacagttgtctatggaagcttccaaa
aaggatgcttgcctgaaagcaattcaagaactgtatgaaataggttcattaagtgattgt
cttttgccaaagcaagagaccacagagccagaggagaaggattcaagcccatctaataca
gatggttgtgaagaggacaattcaagaggagaattacatcagatgttagttccttctccc
tttagaaagtcttggataaatgaagagaaaattgttcatctcaactcatactacataaaa
ttttgcccctctccagaggatagggtttacaaaaagtttggtctattcatcatgacatgt
cttccagcagaggctgagaaactggaacttgatcttcatcttgctcatggtagatctgtt
atgacatcatttgttccatttggagttgtagaattcgacaaagatgagattaagatggct
gaacgttttcaagagatgttccttaaaattattcttgaccgatcagaatttgtttctgat
cttgtaaccctgggtaaaggtgctgaatctcacaatggttcatcaaccttctaccttatg
cttccagttgtattgcaagaatatgaaaatatcatgactgtggattggaagactgtgaga
agatgcctttgttcaccaattttcaagcctccaccagatgctgtgtaccaaaagccttat
ccttctgattcatcacttcaacttgccaatggtaaaagaagcataagagatgttgaaaat
agtttggtatatgccaaacacaaaaagctcttctattttgtcacaaacgtgaaccgtgaa
aagaatggattaagtcccagtaaagattcaggcacttcaagctatgcagatgacttactt
gaaaagtttagtattcatctcaaacaccctgaacagcgacttctgcatgcaaaaccagtt
ttcaatctgcacaacctgctgcataatcggaagtatgaggatacagagccacaggagctg
gaggagttctttgttgatttgcctcctgagctttgcgaattgaaagttgtgggtttttcg
aaggatatgggtagttccatatctttgctaccctcagttatgcatcgtcttggaaactta
ctggttgctattgaactcaagcaaatgctgtctcgattcttcccagaggcagctgaaatt
aattcccatacaattcttgaagctctcacaactgagaagtgtcaggaacggttttcgctt
gaaagactagaagtgcttggagatgcttttctcaaatttgctgttgcacgccattttttt
ctcacatgtgacagtcttcatgaaggagaccttactgcaaggcgttctaatgttgtaaat
aattccaatttgtataaattggctcttaaacgcaatttgcaggtctatatacgtgatcag
gcgtttgatccctgtcaattctacgcatttggccgtccttgcccaatagtttgcaacaat
gaaacagaagaaagtatacactcatgtttaaattctgttaaggagcaaggaagctcaact
gaaatccagtgcaataaaaatcaccactgggtatatagaaaaacaattgctgatgcagtt
gaagctttggtcggagcatttatagttgacagtggctttaaagctgcaattgcatttctt
acgtggcttggcatacaagttagttttgaagcctcacaattgattaatgtttgccgagga
agtgttggctatgttcctctctctgctgatgtaaacattctttccctcgaagataagttg
ggatatcacttcattcataagggtctgcttcttcaggcttttgtgcatccttcttacaat
aagcatggaggaggttgctaccagcgactggagtttcttggtgatgctgtgctggatttt
ttgattacttcatacctgtactcagcttatcccaagctaaagcctggtcaattgacggat
ttgagatcgttgtctgttaacaataaggcatttgcctgtgttgctgtggatcgcagtttt
gataaatttcttttatgtgattctagcaacctttctgaggcagtaaaaaagtatgtggcc
tatattagaagaccttcatcaagtaatgtcaatgaagggccgaaatgtccaaaggctttg
ggtgacttggtggaatcttgtgttggtgctattcttcttgattcagggttcaatttgtac
aaagtttgggaaataatgacttcattcttggatccaatcatgaaattctcatctaacctg
cagcttagtcccaagagggatctgcaagaactatgccaatctcataatttggagttgcaa
ctccaagcatcaaagttgactaaaatgttttcagttgaagcaaaagtgattgtgaatggt
acatgtcaaacagcagtggcaaccgggcaaagtaaaaaagaggctactagaattgcttca
cagaaactattttcagagctaaaggctcaaggctggagaccaaggtcaaaacctttggaa
gaagttttaaaatctacctttaagggggaagcaaaacttattggctataatgaaactccc
attgatgtaacagcaattaattccattgagcactcgacggttaatgggaacttaagtagc
agcaactcaaacccgataattcgccccctccgtgaggtgattggtataaaacctgttgac
caaaaggttcaacattcttctaagggacagcgtagtggaacttatgataatcgtgattgt
gccggtgatttatcaaggacaggaactgcaaggtcacgattgtatgaattctgtgctgct
tcttgctggaaaccaccgacatttgagtgcgtctatgaagggggaccagatcacatgaag
ttattcacatacaaggtgaccttggacatagaagaatccccagatgtgatttatgaattc
attggggaaccaaaaccgaagaagaaagacgcagcagagtccacggctgagggtgtgttt
tggtacctggaacgcgcaggttacctgcctaataagcgtaactaa
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