Arachis ipaensis: 107642402
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Entry
107642402 CDS
T04301
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit E
KO
K07466
replication factor A1
Organism
aip
Arachis ipaensis
Pathway
aip03030
DNA replication
aip03420
Nucleotide excision repair
aip03430
Mismatch repair
aip03440
Homologous recombination
aip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107642402
03420 Nucleotide excision repair
107642402
03430 Mismatch repair
107642402
03440 Homologous recombination
107642402
03460 Fanconi anemia pathway
107642402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aip03000
]
107642402
03032 DNA replication proteins [BR:
aip03032
]
107642402
03400 DNA repair and recombination proteins [BR:
aip03400
]
107642402
Transcription factors [BR:
aip03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107642402
DNA replication proteins [BR:
aip03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107642402
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107642402
MMR (mismatch excision repair)
107642402
DSBR (double strand breaks repair)
HR (homologous recombination)
107642402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF936
zf-CCHC_2
DUF223
zf-CCHC_4
Motif
Other DBs
NCBI-GeneID:
107642402
NCBI-ProteinID:
XP_016201230
LinkDB
All DBs
Position
B05:complement(1995579..1999225)
Genome browser
AA seq
870 aa
AA seq
DB search
MEVKLTESAITKMCENSSSAEDLKPILQVMDFKLVQSQQNNTERFRLVLSDGSHYQQSML
ATQKNDLIHSGKLQRGSIIVLNQYTCSLVQGRSIIIIIELDILLDKCELLGKPVSATKFA
SSQSATDQSGITSGNNVPGPSPEPPKVNQPASSVGSSSFDMGRFGASNAPPAYPKAEPRA
MGPSSGVAGYSSTNVPFTYPKPESGATLPRSGQSGGSYGDQNVGYRNPQSEASRPFQNSY
ARPPQPMYRQPSPVYNNRGPAARNEAHPRIIPIAALNPYQSNWTIKARVTAKGELRHYSN
ARGDGKVFSFDLLDSDGGEIRATCFNTVADQFYNVIEAGNIYLLSRGHIKPAQKNFNHLR
NDQELTLDIGTIIQPCHDDVSIPQQTFNFRPIIEVETIENNTILDVIGVVSSISPTASIM
RKNGTETQKRTLQLKDMSGRSVELTMWGNFCNAEGQRLQSLCDAGRFPVLAAKAVRVSDF
NGKSVGTIATSQLFVEPDFVDACRLREWFDKEGRNVPTISLSREASNFGKSDVRKTVSQI
KDEKLGTSEKPDWISVCASISYMKVDNFCYTACPVLIGDRQCNKKVTNNGDGKWRCERCD
QTVDACDYRYILQFQIQDHTGLTWVTAFQESGEEIMGTSAKELYNLKFEQMDDEKFAEIM
RKVLFGKYMFKLKVKEETYSDEQRVKSTVVKAEKVSFPSESKFLLDMIDKLKSENGEGTN
PSSIANTAGLVSTGTGQSMPPPVYNSVMSNSSAGIDYRTQYSNSFATSTGAPAPASYVSC
SICGCSGHSSAQCPNNMMNMPAQPAARGGGFTSRASAGSGGASGECFKCHQPGHWAKDCP
AYSAAPPAYGSANGMQGRYGIAPKQQYGGY
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaaactcaccgaatcggcgattactaagatgtgcgagaattccagttcggct
gaggatctgaagccgattttgcaagtaatggacttcaaacttgtgcagtcgcaacagaac
aataccgagaggttccgtttggttctctctgatggctcccattaccagcaaagcatgctc
gctacgcagaagaacgatttgatccattctggcaagttgcagagaggttctatcatcgtt
ctcaatcagtacacatgcagccttgtccaaggccgatcgatcattattatcattgagcta
gatattctgttggacaaatgcgagctacttggaaaaccggtcagtgcaacaaaatttgct
tcgtcacaatctgcaactgatcaatcaggaattacctctgggaataatgtgcctggtcct
tctccggaacccccaaaagtaaatcaacctgctagtagtgttggctcttctagttttgac
atggggagatttggtgcatcaaatgcccctcctgcttatccaaaagcagagcctagagct
atgggacctagttctggcgttgcaggttatagttcaacaaatgttccttttacttatcct
aaaccagagtctggagctacattacctagatcaggacagtctggtgggtcttatggtgat
cagaatgtgggttatcgcaatccccaatctgaggcatcaaggccctttcaaaattcttat
gctcgtccacctcagcccatgtatcgacagccatctccagtgtacaataacagaggccct
gcggcaagaaatgaagctcaccctaggatcattccaatagccgcattgaatccataccag
agtaactggacaattaaagctagagtaacagctaagggagaactcaggcactatagtaat
gcccgaggtgatggaaaagtgttttcttttgatcttcttgattctgatggtggagaaatc
cgggcaacttgctttaatactgtggctgatcagttttacaatgtaattgaagctggaaat
atctatctgctttccaggggacatataaagccagcacaaaagaacttcaatcaccttcgt
aatgatcaagaactgacccttgatataggcaccattatacaaccgtgccatgatgatgtg
tcaattccacagcagacttttaacttccgtccaattattgaagttgaaactattgaaaac
aatactattttggatgtgattggtgtggtgtcttctattagtcctactgcttcaattatg
aggaaaaatggcactgaaactcaaaagagaaccctccagttgaaagacatgtctggtcgg
agtgttgaattaaccatgtggggaaatttttgcaatgcagaaggacaaaggctacaaagt
ctctgtgatgctggaagatttccagttttggctgccaaagccgtcagagtaagtgatttc
aacgggaagtcagttgggaccatagccactagccagctatttgtagagcctgattttgtg
gatgcttgtaggctgagggaatggtttgacaaggaggggaggaacgttcctactatttct
ctttccagagaagcatctaattttggcaagtctgatgtgcggaagaccgtatcccagatt
aaagatgagaaattagggacatctgagaagcctgattggatatctgtttgtgcaagtatt
tcatacatgaaggttgataacttctgctacacagcttgccctgtcctgataggtgacagg
caatgcaacaaaaaagtgactaataatggagatgggaaatggcgatgtgaaaggtgtgat
cagactgttgatgcttgtgattataggtacattctgcaattccagattcaggatcacact
ggcttgacatgggttactgctttccaggagagtggcgaggagatcatgggtacgtctgct
aaagaattgtataaccttaaattcgaacaaatggatgatgaaaaatttgcagaaatcatg
cgtaaggttctctttggtaagtatatgttcaagttgaaagtaaaggaggaaacgtacagt
gatgagcagcgtgtcaagtcgacggtagtaaaggcagagaaggtaagctttccatctgaa
tctaaatttcttctggatatgattgataagcttaagtctgagaatggagaaggtaccaat
cctagctccatagctaatactgccggactagtcagcactggaactggacaatctatgcca
ccaccggtttacaattctgtgatgagcaacagtagtgccggtattgattatagaacccaa
tatagcaactcttttgcaacttcaactggtgctcctgctcctgcttcatatgtgtcatgt
agcatatgtggttgctctggtcacagctctgcacaatgccctaacaatatgatgaatatg
cctgctcagccggcagcaagaggcggtggattcacaagcagggcatctgccggatcagga
ggagcctccggcgaatgctttaaatgccatcaacctggccattgggcaaaagattgccct
gcttacagtgcagcaccaccagcttatggaagcgctaacggaatgcaaggtagatatgga
attgccccaaagcaacaatatggaggatattga
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