Arachis ipaensis: 107642424
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Entry
107642424 CDS
T04301
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 34
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107642424
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
107642424
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
107642424
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
HRDC
ResIII
Motif
Other DBs
NCBI-GeneID:
107642424
NCBI-ProteinID:
XP_016201261
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All DBs
Position
B05:2177912..2185344
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AA seq
705 aa
AA seq
DB search
MEDEQTNEVLQELLKVEVDIQDVQEQIRVLVERQEKLYEKKSELSAILEACRESGNEVNN
GASISVENWSGEFQWDSQADDLRLNIFGISSYRANQREIINAIMSGRDVLVIMAAGGGKS
LCYQLPAVLRDGIALVVSPLLSLIQDQVMGLTALGIPAHMLTSTTSKEDEKFIYKALEKG
EGELKILYVTPEKISKSKRFMSKLEKCHHAGRLSLISIDEAHCCSQWGHDFRPDYKNLGI
LKTQFPNVPMVALTATATQRVQNDLMDMLHIPRCVKFVSTVNRPNLFYMVKEKSSVGKVV
IDEIAEFIKESYPNNESGIVYCFSRKECEQVAKELRERGIKANYYHADMDVNAREKVHMW
WSSNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFR
PADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRAAFFRHFAEPLQECNGMCDNCAFS
SEVKEVDVSRHAKLMVSLLQDMQANDQRTTMLQLVEKMKVKQKELGSDLKKEEIEQLILH
LLLEHVLKEEFQHTAYATNAYIALGPLTKPILQGKKAVKLEIYSEQRTKAAVRSAKRSLG
SSGLELKLDELRKELSSVHGGILPHSILSTQQISLLSSQKPKSLEQLEKVIGKLKTEKYG
SRILEQIEKYSDFKPDDQQESGASVAKRSRTKKNLVLIESSEDEA
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaacaaaccaacgaggttctccaagagctcctcaaagtcgaggtcgacatt
caagatgttcaggagcaaattagagtgttagttgagaggcaagagaagttgtacgagaaa
aaatccgagctcagtgctattctggaagcgtgcagagaatctgggaatgaggttaataat
ggggcttccatttctgtggagaattggtctggggaatttcaatgggactctcaagctgat
gatctcaggttgaacatttttggcatttcctcttaccgtgcaaaccaaagagagataatt
aatgccattatgagtggaagggatgtcttggtcattatggctgcaggtggtggcaagagc
ctttgctaccagcttccagctgttcttcgtgacgggattgctcttgttgtcagtcccttg
ctttccttaatccaagatcaggtaatgggtttgactgccttgggcattccggcacatatg
ttgacttcgacaacaagtaaggaagatgagaaattcatatacaaagcattggagaagggt
gagggggaactcaaaatattgtatgtcactcctgaaaagatatcaaaaagcaagagattc
atgtcaaagcttgaaaagtgccatcatgctggtcgtctctctctaatttcaattgatgag
gcacattgctgtagtcagtggggccatgactttcgacctgactacaaaaaccttggtatt
ctcaagactcaattccctaatgttcctatggttgctttgactgcaactgctactcaaagg
gtccaaaatgatctgatggatatgttgcatattccaagatgtgtcaaatttgtcagcaca
gtgaataggccaaacttattttatatggtgaaggaaaaatcatctgttggaaaggtggtt
attgatgaaattgctgaattcattaaagaatcttatccaaataatgaatcaggaattgta
tattgcttctctaggaaggaatgtgaacaggttgcaaaggagttacgggagagaggaatt
aaagccaattactatcatgcagatatggatgtaaatgctcgagaaaaagtacatatgtgg
tggagcagtaacaagctgcaggtcatagttggtacagtagcatttggtatgggaatcaac
aaaccggatgtcaggtttgtcatccatcacagcttgagcaaatcaatggaaacatactat
caggaaagtggtcgagctggacgagatggacttccttctgaatgtctactatactttaga
cctgctgatgttccacgacagagttcaatggtcttctacgaaaattcaggattgcagaac
ttgtatgacattgtacgatattgtcagtccaaacgacaatgtcgacgagctgcctttttc
cggcattttgctgagcctctgcaagagtgcaatgggatgtgtgacaactgtgcattctca
agtgaggtgaaggaagtggatgtctcgcgacacgcaaaactgatggtttcattgttgcaa
gatatgcaagcaaatgatcagaggacaacaatgttgcaattagttgaaaaaatgaaagtg
aagcaaaaggaactaggttcggatttgaaaaaagaggaaattgagcagctcatcttacat
ctattgctggagcatgttttgaaagaagaatttcagcatacagcttatgcaacaaatgct
tacattgctttaggaccactaaccaagccaatattgcaagggaagaaggctgtgaagctt
gagatttatagtgaacaaagaactaaggctgctgtaagatcagcgaaacgcagccttggg
tcctctggtttggagctaaagcttgatgagttgagaaaagaattgtcttccgttcatgga
ggaatattaccacactctatcttgtccacccaacaaatcagcttattaagttctcaaaaa
ccaaagtcattagaacagttggagaaggtaattgggaaattgaagacagaaaagtatggc
agtagaattcttgagcagattgaaaaatattctgatttcaagccggatgatcagcaagaa
agtggtgctagtgttgctaagagatcaaggaccaagaagaaccttgttcttattgagagt
agtgaagatgaagcatga
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