Arachis ipaensis: 107642537
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Entry
107642537 CDS
T04301
Name
(RefSeq) serine/arginine-rich splicing factor SR45a
KO
K12897
transformer-2 protein
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107642537
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aip01009
]
107642537
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107642537
Protein phosphatases and associated proteins [BR:
aip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107642537
Spliceosome [BR:
aip03041
]
Common components
Common spliceosomal components
SR proteins
107642537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
107642537
NCBI-ProteinID:
XP_020978519
LinkDB
All DBs
Position
B05:complement(3911670..3914338)
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AA seq
246 aa
AA seq
DB search
MADSPVRRNSRSPSPWRAQSRSRSRSRSRPRSRSRSRSIPRQRPRSRSRSRGRSRSRSHE
RVGETQNPGNTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDS
VEDANRCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSTRDYGHRGGDRGGDRG
RYRGGPGRDDYQYRRSPRRSPYRGGRDYSPRRSPYGGGGRSRRERSRSPPYSPYGSPDRR
YARGSR
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atggcggattctcctgtgagaaggaactcaaggtccccttccccgtggagagctcaatca
agatccaggtcaaggtccaggtctaggcctaggtctaggtctagatcacgatctatccca
agacaaaggccaaggtcccgttcaagaagccgcggcagatcaagatcaagaagtcatgag
agggtgggagagactcaaaatccagggaatacactttatgtgacaggtctatcgtcaagg
gtgactgagagagacttagaggagcacttctctaaagaaggaaaagttgcatcatgtttt
cttgtggtggagcctcgaacacggatttctcgtggttttgcttttatcacaatggattct
gttgaggatgctaaccggtgtatcaaatatctaaatcaatcagttttagagggtcgctac
atcacagttgagaggtcgcgaagaaagcggccaagaactcccacacctggacactatctt
gggttgaaaagtacaagagactatgggcaccgtggtggtgaccgtggtggtgatcgtgga
aggtatcgaggtggacctggacgtgatgattatcaatatcgacggtcccctaggcgatca
ccatatcgaggtggcagggactattctccaaggcgctctccctatggtgggggtggaaga
tctaggagggaaaggtctaggtcacccccttactctccatacggcagcccagataggaga
tatgctcggggatctaggtga
DBGET
integrated database retrieval system
