Arachis ipaensis: 107642862
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Entry
107642862 CDS
T04301
Name
(RefSeq) plant-specific TFIIB-related protein 1
KO
K03124
transcription initiation factor TFIIB
Organism
aip
Arachis ipaensis
Pathway
aip03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107642862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107642862
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107642862
Prokaryotic type
Archaeal type
TFB
107642862
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
Zn_Ribbon_TF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
107642862
NCBI-ProteinID:
XP_016201842
LinkDB
All DBs
Position
B05:10215116..10218059
Genome browser
AA seq
499 aa
AA seq
DB search
MKCPFCSATQGRCATTSSGRSITECTSCGRVVEERHSHPHHLFHVRAQDNPLCLVTSDLP
NPEPSPITKDDDPFEPTGFITAFSTWSLEPIPLYLQSSLSFSGHLAELERTLESTSSSSS
SSSSSSSTVVVDNLRAYMQIIDVASILGLDCDISDHAFQLFRDCCSATCLRNRSVEALAT
AALVQAIREAQEPRTLQEISIAANVPQKEIGKYMKILGEALQLSQPINSNSISVHMPRFC
TLLQLNKSAQELATHIGEVVINKCFCTRRNPISISAAAIYLACQLEDKRKTQAEICKVTG
LTEVTLRKVYKELLENWDDLLPSNYTPAVPPERAFPMTVIASGRSTTAKVDAIEATLDTE
KLPEIKPNKPTEVSVTVQQPRGKDEAEVKSNARAANHPTQNQQSTYWQSQLPSGTNSHPN
VLQGMDIDRSESNHPHTEKMAEDTNGTASANSLNPSQLYSPPGSSASSVMRQFSASPSSG
HVNVRLAQSPKTMPGYPEN
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtccattctgctcggctacgcaggggcggtgcgccaccacgagctccggtcga
tcgatcacggagtgcacgtcatgcgggcgcgtggtggaggagcggcactcccacccacac
cacctgttccacgtgcgggcccaggataaccctctatgcctcgtgacctctgatctcccc
aaccccgaaccctctccaatcaccaaggacgacgatcctttcgagcccacgggcttcata
accgccttctccacctggtcccttgaacccatccccctctacctccagtcctctctctca
ttctccggccacctcgcggagctcgagcgcactctcgaatccacctcctcctcatcgtcg
tcgtcgtcttcttcttcttcgacggttgtggtggataatttaagggcgtacatgcagatt
atcgatgtggcctccatacttggcttagactgcgatatttccgaccacgcttttcagctg
ttcagggattgttgctcggctacttgcctcagaaaccgtagcgttgaggctcttgctact
gccgctcttgttcaagccattcgagaggcccaagagcctcgaacccttcaggaaatttca
atagcagctaatgtaccacaaaaggaaattgggaagtatatgaagattctgggagaagct
ttacagctaagtcaacctattaacagcaattccatatcagtccatatgccaagattttgc
acgctcctacagctcaacaaatctgctcaggaactggctactcacataggagaggttgtg
atcaacaaatgcttctgcactcgtaggaatccaattagcatttcagctgctgctatatat
ttggcttgccaactcgaagacaaacgtaaaactcaggctgaaatttgcaaggtaactggc
cttactgaagtcactctacgtaaagtgtacaaggaactactggagaattgggatgatttg
cttccatcaaattacaccccggctgtgcctccagagagagcatttcccatgaccgtaatt
gcttctggtcgctccacaacagctaaggttgatgcaatagaggccactttggacacagag
aagttgccagaaatcaaacctaacaaaccgactgaggtctcagtcactgtgcaacagccc
agagggaaggatgaggccgaagttaaaagcaatgcccgtgccgccaaccatcccacacag
aatcaacagtcaacttattggcaatcccagcttcccagtgggacaaacagtcatcctaat
gttttgcaaggaatggatatcgacagatcagagagtaaccacccccacactgaaaagatg
gcagaggacacaaatggcactgccagtgccaattctctaaacccaagccaactttacagt
cctcctggttcaagtgcaagctctgttatgaggcagttttcagcttccccttcatctgga
cacgtgaatgttcgattagcgcagtcacctaagacaatgccaggttatccggagaactga
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