Arachis ipaensis: 107643217
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Entry
107643217 CDS
T04301
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107643217
03036 Chromosome and associated proteins [BR:
aip03036
]
107643217
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
107643217
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107643217
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
107643217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_16
ATPase_2
AAA_22
Helicase_RecD
DEAD
PhoH
Mov-10_helical
MOV-10_Ig-like
AAA
SLFN-g3_helicase
AAA_7
Bac_DnaA
Flavi_DEAD
AAA_24
AAA_5
Motif
Other DBs
NCBI-GeneID:
107643217
NCBI-ProteinID:
XP_016202293
LinkDB
All DBs
Position
B05:complement(18689167..18693905)
Genome browser
AA seq
883 aa
AA seq
DB search
MSTVGYRSDDECSYVGGKGEIGFLDFEEEKSVCSYAAIDDGDPVIISVPFAFVNGKPQSV
FVGDTAVDLITINNTTKEPVQLWTVHIFASNPQNTFTLSLMEPPSANSNSNGDSDEGFLE
SFGLEDRMLQPGEILKIWLSCKTKEMGMYQSIVHFDVGEERIERVVFVLVEDKISKSLAS
KRPYSRQRRKDKFAVDNFIAGSRPAGKTNRAYINRLPKYDIPGDIRNLLESNQIPEAVEG
GLTRKNYASFFKTLVIMEEIQLEEDMRTYDMECVTMRKRPNQFLSMLVPGLAERRPSLVH
GDFIFAKLASENDKNTGRPYQGFIHRVEADEIFLKFDNEFHLRHRDGNLYDVHFTYNRIN
MRRLYQAVEAASGLGSEFLFPSTLARKRFIETTDLIPISGTFNDEQISSIKSILGCKGAP
PYLIYGPPGTGKTKTIVEAVLQLYKHNKNARILVCAPSNSAADHILEKLLAEKSVEFQEN
EIFRLNASTRPYEDIKPEIIRFCFFDELIFKCPPVSALRHYRIIISTYMSACLLYAEDVS
RGHFSHIFLDEAGQASEPETMIPISHLCRRETVVVLAGDPMQLGPVIYSKKADTHGLGTS
YLARLFQCEMYATGDANYATTLVNNYRCHPEILHLPSKLFYNGALIACRDKTTFMVSPGF
LPNEEFPILFFGIQGCDEREGNNPSWFNRIEVSKVVEVVKRLTAGGNIMEEHIGIIAPYR
QQVLKIKQTLENQEMPDIKVGSVEQFQGQEKEVIIISTVRSTIKHNEFDRVHCLGFLSNH
RRFNVAVTRAISLLVIIGNPHIICKDNYWSQMLWHCVDNSSYQGCTHPDKPKPYVEDAGD
NNVKPYGEVNGEDSVEWGQDLSQVEIPKPVTDEAEWSDGWRSS
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgttggatataggtcagatgatgaatgctcttatgttggaggaaaaggagaa
atcgggtttctagattttgaggaagagaaatctgtttgtagttacgctgctattgatgat
ggcgatccggttatcatatccgtcccatttgcatttgtgaatgggaagcctcaatcagtg
tttgttggagatactgctgtggatttaataaccatcaataataccaccaaagagcctgtg
cagttgtggactgttcatatttttgcctcaaatcctcagaacactttcactctttctctg
atggaacctccatcagcaaattcaaattcaaatggagattcagatgagggctttctcgaa
tcatttggattggaggatagaatgcttcagcctggtgagattttaaaaatatggttgtct
tgcaagacaaaagaaatgggcatgtaccaatcaattgtgcattttgatgttggagaagaa
agaatagaaagggtggtttttgtcttagttgaagacaagatttcgaaatcgttggcttct
aagaggccttattctcgacaaagaagaaaagacaaatttgcagtagataatttcattgca
ggctcacgtcctgcagggaaaacaaatcgggcctacattaataggcttccaaaatatgat
attcctggggatattagaaacttgcttgagagcaatcagatccctgaagctgttgaaggt
ggtctaacaagaaagaattatgcttcttttttcaaaacgttggtgataatggaagaaata
caattagaggaagacatgaggacttatgacatggaatgcgtaacaatgaggaagagaccc
aatcaatttttgtccatgttggttcctgggcttgctgagagaagaccatcactggttcat
ggggatttcatctttgccaaactagcatctgaaaatgataagaacactggacgcccttat
cagggatttatccatcgtgttgaagctgatgagatctttttgaagtttgataatgaattt
cacctgcgtcatagagatggaaatctttatgatgttcacttcacctacaataggatcaat
atgagaaggttgtatcaagcagttgaggcagccagtggcttaggatccgagttccttttt
ccatctactttagccaggaagaggttcattgaaaccactgatctgattcccatatctggt
acttttaatgatgagcaaatttcttcaatcaaaagtattcttggttgcaaaggggcgcca
ccatatctgatttatgggcctccaggtacgggaaagactaagacaatagtagaagcagtt
ctccagctctacaaacataataagaatgcccgcattcttgtctgtgcaccatcaaatagt
gcagcagaccacatattagagaaactgcttgctgagaagtctgttgagtttcaagaaaat
gaaatattcaggctcaatgcttctaccaggccatatgaggatatcaaacctgaaattatc
cgtttctgcttctttgatgagttgatatttaagtgcccgccagtcagtgccctcaggcat
tataggattataatatcaacatatatgagtgcctgtcttctttatgcagaagatgtttca
cggggtcatttctctcacattttcttggatgaggctggccaagcctcagaacctgaaacc
atgatccctatatcccatctctgcagaagggaaactgttgttgttctagctggagaccca
atgcagttgggtccagtaatttattcgaagaaagcagatacacatggattggggacatca
tacctggcacgactgtttcaatgtgagatgtatgcaactggagatgcaaattatgcaacg
acattggttaataattatcgatgccatccagagatattacatctcccttcaaagctgttt
tataatggggcgttgattgcatgcagagacaagacaaccttcatggtgagtcctggcttc
ctccctaatgaggagtttcccattcttttctttggcatccaaggatgtgatgaaagagaa
gggaataacccctcatggttcaaccgaattgaagtgagcaaagttgtcgaagttgtcaag
aggctgacagctggtgggaatataatggaggaacacattggcataatagcaccatatagg
caacaagtactcaaaattaaacagactcttgaaaatcaagagatgcctgatatcaaagtt
ggtagtgttgaacagtttcaaggacaagagaaggaagttattatcatatcaactgttcga
tcaaccatcaaacacaatgagtttgacagagtccactgtcttggctttttgagcaatcat
agaaggtttaatgtggctgtaactcgtgccatatcattgttggttatcatcgggaatcca
cacattatttgcaaggacaattattggagccaaatgctgtggcactgcgtagacaattca
tcttatcagggttgtacacatcctgataagccaaaaccttatgttgaggacgctggagac
aacaatgtgaagccttatggagaggtcaatggagaggactctgtagaatggggtcaagat
ttatcccaggtggagattcccaaacctgttactgatgaggctgaatggtctgatggctgg
agaagtagttga
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