Arachis ipaensis: 107643496
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Entry
107643496 CDS
T04301
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
aip
Arachis ipaensis
Pathway
aip03030
DNA replication
aip03420
Nucleotide excision repair
aip03430
Mismatch repair
aip03440
Homologous recombination
aip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107643496
03420 Nucleotide excision repair
107643496
03430 Mismatch repair
107643496
03440 Homologous recombination
107643496
03460 Fanconi anemia pathway
107643496
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aip03000
]
107643496
03032 DNA replication proteins [BR:
aip03032
]
107643496
03400 DNA repair and recombination proteins [BR:
aip03400
]
107643496
Transcription factors [BR:
aip03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
107643496
DNA replication proteins [BR:
aip03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
107643496
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
107643496
MMR (mismatch excision repair)
107643496
DSBR (double strand breaks repair)
HR (homologous recombination)
107643496
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
107643496
NCBI-ProteinID:
XP_016202654
LinkDB
All DBs
Position
B01:complement(137263791..137267513)
Genome browser
AA seq
640 aa
AA seq
DB search
MPVNLTADAIPAIVAGDVNSKPLLQVLEIKLISNSKQQERYRLLLSDAVSSQHAMLATQL
NDRVTTGQVKKGSVVQLIEYICSPIQNRKIVVVLNMETIIPECEIIGNPISFVESDLPAQ
GASLSNTMQNLSKSSYYQLPPQNTSYNVQNFQLPPKNASSYVQNFRPTVQTAYKPPPVYK
GQGAILRNEAPSRVIPISALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSE
GGEIRVTCFNAVVDRFYDAIEVGRVYLISKGSLKPAQKNFNHLKNDWEILLESTSTLELF
PEEDGSIPKQQFSFKPINDIENVDNNSILDVIGVVTCVNPSVPILRKNGMETQKRILNLK
DWTGRSVELTLWGEFCNKEGKNLQEMVDAGLFPILAVKAGKVNDFSGKSIGTISATQFFI
NPDFPEARSLREWFDRVGKDSASLSISKDIIPGGSKNDVRKTLSQIKDEGLGRSDKPDWI
TVRAAVSFIKTDSFCYTACPLKIGERQCNKKVTKSGNSRWQCDRCNQEFDECDYRFLLQA
QILDHTGIAWVTAFQETGEEIMGFSAKELYLLKHEQEDDEKFIGIIKSRLFNEFVLRLKI
KEELYGDEQRLKITVAKADKVDYSSECKYVLDLISKFGRQ
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctgacggcggacgcgatcccggcgatcgtagcaggcgacgttaactcg
aagccactgttgcaggttctggaaatcaagttgatttcgaacagcaagcagcaggagagg
taccggcttctgctatccgatgcggtttcttctcagcacgctatgcttgccactcagctc
aacgatcgggtcacaaccggacaagttaagaaaggttcagtcgttcagctcatcgagtac
atttgcagtcctattcaaaaccgcaagattgttgtggtgctgaacatggaaactataata
ccagaatgcgagatcattggaaatccaatatcatttgtggaatctgatttaccagcccag
ggtgcttcactaagtaatacaatgcagaacttgtccaagagtagttattatcagctgcca
ccgcaaaatacaagttataatgtccagaatttccagctgccaccgaagaatgcaagttcc
tatgtgcaaaatttccggccaactgttcaaactgcttacaaaccgccaccagtttacaaa
ggccaaggtgcaattctgaggaatgaggccccgtcacgtgttattcctatatccgctctg
aatccttatcaaggtcggtgggccatcaaggcaagggtgactgcaaagggggatctgcgc
cgctataataatgcccggggagatggtaaagtcttctcctttgatctccttgactctgaa
ggtggtgaaatacgagtgacctgttttaatgctgttgttgatcgattctatgatgcgatt
gaggttggaagagtttacttgatatctaaaggtagcctaaaacctgcacagaagaacttt
aaccatttgaagaatgactgggaaattcttttggagtcgacatcaactcttgaacttttc
cccgaggaagatggttctatacctaaacagcaattttcgtttaagcctatcaatgatatt
gagaacgttgacaataactccatacttgatgttattggggttgtgacttgtgtgaatcca
tcagttcccatcttgaggaagaatggaatggaaacccagaaaagaattttgaatctgaag
gactggactggaaggagtgttgaactgaccctttggggtgaattttgcaacaaggaaggg
aaaaatttgcaagaaatggtcgatgctggattgtttcccattctggcagtcaaagctggg
aaggtcaatgactttagtggaaaatccatagggactatctctgccacacagtttttcata
aatcctgattttcctgaggcacgtagcttaagagaatggtttgatcgagtgggaaaagat
tctgcttctctgtccatttctaaggatatcatacccggaggatctaagaatgatgtacgt
aaaactctgtctcagatcaaggatgaaggtcttgggcgttcggataagccagattggata
acagtgagggcagctgtatctttcatcaagacagattcgttctgttacacagcttgccct
ctgaagattggagagcgacagtgcaataagaaagtgaccaaatcaggaaactcgaggtgg
cagtgtgataggtgcaaccaagagtttgatgagtgcgattaccggtttcttcttcaagct
caaattctggatcacactggaattgcttgggtaactgcttttcaggaaacaggggaagag
attatgggcttctcggcgaaggaattgtacttattgaagcatgaacaagaggatgatgag
aagttcataggaataatcaagagtagactgttcaatgagtttgtcttgaggctgaaaatc
aaagaggaattatatggtgatgaacagaggttgaagattacagtagcaaaggcagataag
gtggattactcttcggagtgtaagtacgtgcttgatttgatttcgaaattcggtaggcag
taa
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