Arachis ipaensis: 107643500
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Entry
107643500 CDS
T04301
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase lambda
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
aip
Arachis ipaensis
Pathway
aip03410
Base excision repair
aip03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107643500
03450 Non-homologous end-joining
107643500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107643500
Enzymes [BR:
aip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
107643500
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
107643500
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
107643500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
NTP_transf_2
HHH_5
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-GeneID:
107643500
NCBI-ProteinID:
XP_016202655
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All DBs
Position
B05:complement(27305498..27311544)
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AA seq
540 aa
AA seq
DB search
MAPKTKPKKKRSPSSESEPDGMFSGMVVFFVPKGVQPRRLQVWKQRLVQMGGVIEERLSR
RVTHVFAMDSHTLLKELDKERLSRFKGKVILYQWLEDSLKSGEKLSEDMYELKLDPQSAD
IPHKPLNSKPTYGNLSSDSQQSPSKKIKLSSEETKVADLKSNENKTENSPLKMDNIANAD
IIHFMFLCSCXNCSNNGRALQSSLPYCPPDLNKNITEIFGKLVNIYRALGDDRRSFSYYK
AIAVIEKLPFKIESTDQIKDLPSIGKSMKDHVQEIITTGKLSKLEHFETDEKVRTISLFG
EVWGIGPATALKLYEKGHRTLDDLRNDDSLTNAQKLGLKYFDDIRQRIPRHEVQEMERIL
QKVGEEVLPGVIIVCGGSYRRGKATCGDIDVIITHPDGQSHKGFLPKFVQCLKDIDFLRE
DLVFSTHSEEGTDSGVDTYFGFCTYPGRELRHRIDLKVYPRDIYAFGLIAWTGNDVLNRR
LRLLAESKGFRLDDTGLFPATQGSGGKRGAKGIASLKFDTEKEVFDFLGFPWLEPHERNL
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaaaaacaaaaccaaagaagaagcgaagcccttcctccgagtcagaacctgat
ggaatgttttcaggaatggtggttttcttcgtccccaaaggagtccaaccacgtcggttg
caggtttggaagcagaggttggtgcaaatgggtggtgtgattgaggagcgcctctccaga
cgggtcactcatgtttttgcaatggactctcatactcttctcaaagaactggacaaggag
cgtttatcacgttttaaggggaaagttatcctttaccaatggctggaggacagcttgaaa
tctggggaaaaactatctgaggacatgtatgagctgaagttggatcctcaaagtgcagat
attcctcataagcctttgaactctaagccaacttatggaaacttgtcaagtgattctcag
caatcaccgagtaaaaagatcaagttatcttctgaagaaacaaaggttgcagatctcaaa
agtaatgaaaataaaacagaaaattctccactcaaaatggataatattgcaaatgctgac
attatacattttatgtttctttgttcctgttgaaactgttctaacaatgggagggcattg
cagtcatccttgccatactgtccacctgacctcaacaagaatataacagagatatttgga
aaacttgttaacatatatagagcactgggtgatgatcggagatccttcagctattacaag
gctattgcagtgattgagaagttgccgtttaaaattgaaagcacagaccagatcaaagac
ctgccttctattggaaaatcaatgaaagatcatgttcaggagataataactactgggaag
ttatccaaactggaacactttgaaactgatgagaaggtgcggacaatatccttatttgga
gaagtatggggtattggtcctgccacagcactgaaattgtatgagaaaggacaccgtaca
ttagatgatctaaggaatgatgattcacttacaaatgcacaaaagttagggttgaaatac
tttgatgatatcaggcaacgaattccacgccatgaggttcaagagatggagcgcattttg
cagaaagttggggaggaagttttgcctggggttattattgtttgtggaggatcatatagg
cgcgggaaggctacttgtggtgacattgatgttattataacacatcctgatggacaaagt
cacaaaggatttttgccaaagtttgtacagtgtttaaaggatattgatttcctgagagag
gatttagttttcagtactcatagcgaagagggtactgactctggtgttgacacttacttt
ggcttttgcacttatcctggacgggagttgcgacatagaattgatttaaaggtctaccca
agggacatatatgcttttggactaatagcttggacaggaaacgacgtattaaataggagg
ttgagactgcttgctgaatctaaaggatttcggcttgatgatacaggcttgtttccagct
actcagggttctggaggcaaacggggtgcaaaaggtattgcaagtttgaaatttgatacg
gagaaggaggtgtttgatttcttgggctttccttggcttgaaccacatgaaagaaatctt
taa
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