Arachis ipaensis: 107644067
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Entry
107644067 CDS
T04301
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X1
KO
K05391
cyclic nucleotide gated channel, plant
Organism
aip
Arachis ipaensis
Pathway
aip04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
107644067
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
aip04040
]
107644067
Ion channels [BR:
aip04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
107644067
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF6525
Vps55
Motif
Other DBs
NCBI-GeneID:
107644067
NCBI-ProteinID:
XP_016203338
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Position
B05:complement(127005855..127024299)
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AA seq
768 aa
AA seq
DB search
MASLKNDELPMLSRKESKDEEQYDETLNSKLQRFLSRTQSSIAIPMSTLESYDSETSLVG
HTGPLKSERKTPFPQMSGPLYAAGTGSHLQQRMVGTGRKEDERKTEKFDAFRGTGSNNWH
NNHDKENQHLMRSGQLGMCNDPYCTTCPTYFKSSQHKNSKSSTIFDPKFHNALYGDAKGF
ATKFYSLCRSYIPGVINPHTKVIQQWNKILAIFCLVAIFVDPLFFFVFYAREDHNCVVID
WSMTTTLVIVRSLNDLVYFFNILLQFKLAYVSPESRVVGTGDLEDHPKEIALHYLRGYFF
LDLFVVFPLPQIMILFVLPKSLGGANYAKNLLRAAILVQYIPRLFRFLPMLIGQSPSGFI
FESAWANFIINLLIFMLSGHVVGSCWYLFGLQRVNQCLRDACHNSKIPGCMVFIDCGHGH
DGIFQLDQTSNQWNNNTDAVACLNPPSNGGFSYGIYQNVVPLTTETNVINKYIYSLFWGF
QQISTLAGNLVPSTFVWEVLFTMAIIGSGLLLFAILIGNIQNFLQALGRRRLEMQLRGRD
VEQWMSHRRLPENLRRRVRQAERYSWAATRGVNEEMLMENLPEDLQRDIRRHLFKFIKKV
RIFALMDEPILDAICERLRQRTYIKGSIILSMGCLVDKMVFVVRGKLESVGEDGIRLPLS
EGDACGEELLTWYLEHSSVSTDGRKVRLPGQRLLSNRTVRCLTNVESFSLRAADLEEVTI
LFTRFLRSPRVQGALRYESPYWRSLAAIRIQVAWRYRKKRLSRADSAV
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggctagtcttaaaaatgatgagctgccaatgctgtcgagaaaggaatcaaaggatgaa
gaacaatatgatgagaccctgaattccaaattgcagagattcttatccaggacacaaagt
tcaattgcaattcctatgagcaccctggagtcatatgatagcgaaactagtcttgttgga
cacactggtccactgaagagtgagagaaaaaccccctttccacaaatgagcggtccacta
tatgctgccggaactggaagtcatttacagcagaggatggttggtacaggaagaaaagaa
gatgaaagaaagacagaaaaatttgatgctttccgtggcaccggttcgaataactggcat
aataaccatgataaggaaaatcaacacttaatgaggtctggacaacttggaatgtgtaat
gatccttattgcactacttgcccgacatacttcaagtcttctcaacataaaaattcaaaa
tcttcgacaatatttgatcccaagttccacaatgctctctatggggacgccaagggattt
gcaacaaagttttattccctttgtcgttcgtacattcctggagttataaatcctcacact
aaagtcatacaacaatggaacaagattttggccattttttgcttggttgctatttttgtg
gatccattatttttctttgtattttatgcacgagaggatcataattgtgttgttatcgac
tggtcaatgacaacaacacttgttattgttcgaagcttgaatgatttggtatatttcttt
aacattcttctccagttcaaattggcttatgtttctcctgagtcaagggtggttggtact
ggagatttagaggaccatccgaaggaaatcgcacttcattaccttcggggttattttttt
cttgacttatttgttgtatttcctcttcctcagataatgatattgtttgtcttgccaaaa
tcccttgggggagcaaattatgctaagaatcttctgcgtgcagcgatccttgtgcagtac
atccccagattgtttagatttctgcctatgctaattggccagtctccatcaggatttata
tttgagtcagcctgggcaaattttataataaaccttctaatttttatgctatctggacat
gttgttggctcttgctggtacctctttggtctgcagagggttaaccaatgtttgcgagat
gcctgccacaattctaagatccccggatgcatggtattcattgattgtgggcatggtcat
gatggaatctttcagcttgaccaaacatcaaatcagtggaacaacaatactgatgctgtt
gcttgcttgaatcccccatctaatggtggtttttcttatgggatatatcaaaatgttgta
cctcttactacagaaactaatgtgatcaacaaatacatctattctttgttttggggattc
cagcaaatcagtactttggctggtaatctagtccctagcacttttgtgtgggaagtcctt
ttcactatggccattataggatctggactcttgctttttgctattctcattggtaacata
cagaattttcttcaagctcttgggcggaggaggctagaaatgcaactcaggggacgtgac
gtggagcaatggatgagccatcgacgcttaccagaaaatctaagaaggagagtacgacag
gctgaacgttattcttgggctgcaacaaggggagttaacgaagaaatgcttatggaaaat
ttaccagaagatctacagagagacataaggcgtcatctcttcaaatttattaagaaagtt
cgaatttttgctttgatggatgaacctatcctagatgccatttgtgagagattaagacaa
aggacatacataaaaggaagtattatattgagtatgggttgtctggtagataagatggta
ttcgtggtgcgaggaaagctcgagagtgtcggagaagatggaataagacttccgttatcc
gaaggggatgcctgtggcgaagaacttctaacatggtatttagaacattcttctgtcagc
acagatggtagaaaagtaaggcttcctggacaaaggttgcttagcaacagaacagtgagg
tgcttaacaaatgtagagtcattttcgctccgcgccgcagatcttgaagaagtcacaatc
cttttcacaagattcttgcggagtccgcgtgttcaaggagccctaaggtatgaatcacct
tattggagatccttagctgcaattcgtattcaagttgcatggagatacaggaagaaacgt
ctaagtcgtgctgattctgctgtttaa
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