Arachis ipaensis: 107644114
Help
Entry
107644114 CDS
T04301
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1
KO
K12236
transcriptional repressor NF-X1
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aip03000
]
107644114
04121 Ubiquitin system [BR:
aip04121
]
107644114
Transcription factors [BR:
aip03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107644114
Ubiquitin system [BR:
aip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
107644114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
RNA_bind
NCBP3
R3H
Motif
Other DBs
NCBI-GeneID:
107644114
NCBI-ProteinID:
XP_016203405
LinkDB
All DBs
Position
B05:complement(129378870..129382984)
Genome browser
AA seq
1109 aa
AA seq
DB search
MSVQAQRDRRSRSRVPPQGGPRQEWVPRGSSTTTAVQPSNLQSDQNADSAGSSSNGADAV
PVAAATAPVSTAPPAVVRHNRSNHGAVNQRREVEKGRSSGNQAGKGLKMRDSSLPQLVQE
IQEKLMKGTVECMICYEMVRRSALVWSCSSCYSIFHLNCIKKWARAPTSIDLSAEKNQGF
NWRCPGCQSVQLTSSKEIRYVCFCGKRVDPPSDLYLTPHSCGEPCGKPLEKEVFSNGGSK
EDLCPHVCVLQCHPGPCPPCKAFAPPRLCPCGKKTITTRCFDRQSVLTCGQRCEKLLECG
RHRCERICHVGACDPCQVLINASCFCSKKVEVLPCGDMTMKGEFTAEAGVFTCGSNCGRK
LSCGNHMCNEICHPGSCGECDLLPRRVNTCCCGKTKLDEERKSCLDPIPTCSQVCAKSLP
CGTHHCKEVCHVGDCPPCLVLVSQKCRCGSTSRIVECYKTTAENEKFTCEKPCGRKKNCG
RHRCSERCCLLSNPNNNLSSEWDPHFCSMPCEKKLRCGQHACESLCHSGHCPPCLETIFT
DLTCACGRTSIPPPLPCGTPPPSCQLPCSVPQPCGHIALHSCHFGDCPPCSVPVAKECIG
GHVVLRNIPCGSKDIRCNKLCGKTRQCGLHACGRTCHPPPCDNLSCGVQGLPAPCGQTCG
APRRDCRHTCTAPCHPSTPCPDVRCEFPVTITCSCGRITANVPCDAGVSSSNYNADAVHE
ASITQKLPIPLQPVDPNGKKVPLGQRKLMCDDECAKLERKRVLADAFDITTPNLDSLHFG
DNSVDLISDLYRRDPKWVISVEERCKFLVLGKSRSTTHGLKVHVFCPMLKEKRDAVRVIA
DRWKLAVSAAGWEPKRFIVIHVTSKSKAPTRVLGVKGTPTISAPLPPAFDHLVDMDPRLV
VSFPDLPREADISALVLRFGGECELVWLNDKNALAVFHDPARAATAMRRLDHGTFYQGAV
SVVPNVGATTTSSTTGAWGAGTMKEGALSVLKGNAWKKAVVQESSWREDSWGDEEWTTGS
ANVQQSAWKKEAPIAASFNRWNLLDHESGQSSSSTNVKKAEASGKNTESSAVLRLESHAA
GSNEQGKRGGNLDATEASEVVDDWEKAYE
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttcaagctcagagagaccggaggagtaggtccagagttccgccgcaaggtggt
ccacgtcaagaatgggttcccagaggatcatctaccactactgctgttcaaccatcaaat
ttgcaatctgatcaaaatgctgattctgctggtagttccagtaatggtgctgatgctgtt
cctgttgctgctgccaccgcccctgtttccactgccccacctgcagtggttcgccataat
agaagcaatcacggggctgtgaatcagaggagggaagtggagaaagggaggagtagtggg
aatcaggctgggaaggggttgaagatgagggactctagtttgcctcagttggtgcaggag
attcaggagaagctcatgaaagggactgtggaatgcatgatttgttatgaaatggtacgg
aggtctgcacttgtttggtcttgttcgagctgctactctatctttcacctcaactgcatc
aagaagtgggctcgtgcgcctacgtcgattgatttgtcagctgagaagaatcagggcttt
aattggcggtgtcctggttgtcaatcggtgcagcttacttcgtcaaaggagattcggtat
gtttgcttttgtgggaaaagggtggaccctccatctgatttgtatttgacgccacattcg
tgtggagaaccatgtgggaagcctcttgagaaggaggtgttctctaatggtgggagtaag
gaagatctttgccctcatgtttgtgtcttgcaatgccatcctggtccttgtcctccgtgt
aaagcatttgcccctccgcgcttatgtccatgtgggaagaagacaattaccacccgttgt
tttgataggcaatctgttcttacatgtggccagcggtgtgagaagcttctcgagtgtggg
cgtcaccgatgtgaacgcatttgtcatgtcggagcttgtgacccatgtcaggttttgatc
aatgcctcttgcttttgtagtaagaaggtagaggttcttccatgtggggacatgactatg
aagggtgaattcacagcagaagctggagtttttacctgtggttccaattgtggaaggaaa
cttagttgtggtaatcacatgtgcaatgagatttgtcatccaggaagttgcggggagtgt
gatttgttaccaaggcgtgttaacacatgctgttgtgggaaaacaaaattggatgaggaa
cgcaaaagttgtttggacccaatacctacctgctcgcaagtttgtgccaaatcacttcct
tgtggcacacatcattgtaaagaggtgtgtcatgttggggattgtcctccatgcttggtt
cttgtgtcccagaagtgccgttgtggttcaacatcccgcatcgtggaatgctataagaca
acagcggagaatgagaagtttacttgtgaaaagccttgtggaagaaaaaagaattgtgga
agacatcggtgtagtgaacggtgttgtctactttctaatcccaataacaatttaagtagt
gaatgggatccacacttctgttcgatgccatgtgaaaagaagttaagatgtggccagcat
gcttgtgaatcactatgtcacagtggccattgcccaccttgtcttgaaaccatctttaca
gatctgacatgtgcttgtggtaggacttcaatccctcctccactcccttgtggtacgcca
cctccttcatgccagcttccatgttcagttcctcagccttgtggccatatagccttgcac
agttgccactttggagactgccctccttgttcagttcctgtagcaaaagaatgtattggt
gggcatgttgttcttaggaacattccttgtggttcaaaggacattagatgcaataagcta
tgtgggaagaccagacaatgtggcttacatgcatgtgggagaacttgtcacccccctcct
tgtgataatctatcttgcggtgtgcaagggttaccagcgccttgtgggcaaacgtgtgga
gctcctagaagagactgtcgtcatacatgtacagctccgtgtcacccatccactccatgc
ccagacgtaagatgtgagtttcctgttacaattacctgttcttgtggccgtataactgca
aatgttccatgtgatgctggtgtcagcagtagtaattataatgctgatgctgtacatgaa
gcttccatcactcaaaaattgcctatcccactacaaccagttgatccaaatggcaaaaaa
gttccccttggacaaagaaagctgatgtgcgatgatgaatgtgctaagttagagcgcaag
agggttcttgctgatgcttttgatattactactccaaatcttgattctctccattttggc
gacaattctgttgatttgatttctgatttgtaccggcgtgatcctaaatgggttatttct
gttgaggagagatgcaaatttttagtgcttggcaaaagcagaagcacaactcatggttta
aaggtccatgttttctgtcctatgctgaaggagaaaagagatgcagtgagggtaattgca
gatagatggaagcttgctgtgagtgctgctggttgggagccgaagcgttttatcgtaatt
catgttacctcaaaatcaaaagccccaacccgtgtgctaggggttaagggtactccaact
ataagtgcaccccttcctcctgcatttgatcacttggtagacatggaccctaggcttgtt
gtttcattccctgacttaccaagggaggctgatattagtgctttggtgttgagatttggt
ggcgagtgtgagcttgtttggctgaatgacaaaaatgccttggctgtttttcatgaccct
gctcgagctgcaacggcaatgaggaggttagatcatggtacattttatcagggagctgtt
tcggttgtgcccaatgttggggcaactaccacatcttcaactacaggtgcctggggagcg
gggacaatgaaagaaggagcactatctgtgttgaaaggtaatgcatggaagaaagctgtg
gttcaagagtccagttggagagaagattcttggggcgatgaagaatggactactggatct
gctaatgtccagcaatctgcttggaaaaaagaagcaccaatagctgcttcttttaaccgt
tggaatttattagaccatgagtcaggtcaaagttcatcttctacaaatgtgaaaaaagca
gaagcttctgggaaaaacactgaaagcagtgctgtcttgaggttggagtctcatgcagct
ggttcaaatgaacaagggaaacgtggtgggaacttggatgcaactgaagcttctgaagta
gtagatgattgggagaaggcttatgaatga
DBGET
integrated database retrieval system
