KEGG   Arachis ipaensis: 107644456
Entry
107644456         CDS       T04301                                 
Name
(RefSeq) RNA polymerase II transcription factor B subunit 5
  KO
K10845  TFIIH basal transcription factor complex TTD-A subunit
Organism
aip  Arachis ipaensis
Pathway
aip03022  Basal transcription factors
aip03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:aip00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107644456
  09124 Replication and repair
   03420 Nucleotide excision repair
    107644456
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aip03021]
    107644456
   03400 DNA repair and recombination proteins [BR:aip03400]
    107644456
Transcription machinery [BR:aip03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107644456
DNA repair and recombination proteins [BR:aip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107644456
SSDB
Motif
Pfam: Tfb5 Met_asp_mut_E
Other DBs
NCBI-GeneID: 107644456
NCBI-ProteinID: XP_016203803
LinkDB
Position
B05:complement(139730413..139733131)
AA seq 70 aa
MVNAIKGVFISCDIPMAQYIINMNASLPASDKFIIHILDSTHMFVQPQVEQMIRSQIAKF
REDNTYVKPN
NT seq 213 nt   +upstreamnt  +downstreamnt
atggttaatgccattaaaggagttttcatttcctgtgacatacctatggctcaatatatc
atcaatatgaatgcttcacttcctgcatctgacaaattcatcatacatattttggatagt
acccacatgtttgttcaaccccaggtggaacaaatgataagaagtcaaattgccaagttt
agagaggacaatacctatgtcaagcccaattga

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