Arachis ipaensis: 107644526
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Entry
107644526 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 46 isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107644526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107644526
03009 Ribosome biogenesis [BR:
aip03009
]
107644526
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107644526
Spliceosome [BR:
aip03041
]
Complex A
U1 snRNP components
U1 related factors
107644526
Complex B
107644526
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
Pre-60S particles
Helicases
107644526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
107644526
NCBI-ProteinID:
XP_016203887
LinkDB
All DBs
Position
B05:141596569..141602670
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AA seq
809 aa
AA seq
DB search
MAATATASSVGPRYAPPDPTLPKPWRGLVDGKTGYLYFWNPETNVTQYERPSSSSASPKY
SSSVSSSSVQVQQSSQGQQRGRSPELGDRYDRNSGGGSNNEGGLRNYQDSKGGNFSSHNA
PNGMHSAGNVSSSIKGQGAPDTGVGLSPEAYRRRHEITVTGDDVPPPLTSFSSSGLPSEI
LREVQNAGFSAPTPIQAQSWPIALQSRDIVAIAKTGSGKTLGYLIPAFIHLKRTGNDPRM
GPTALVLSPTRELATQIQDEAVKFGKSSKITCACLYGGAPKGPQLRDIDRGADIVVATPG
RLNDILEMRRITLNQISYLVLDEADRMLDMGFEPQIRKIVNEVPARRQTLMYTATWPKEV
RKIAADLLVNPVQVNIGNVDELVANKSITQHVEVLTYMEKQRRLENILRSQDQGSKIIIF
CSTKKMCDQLARNLARQFGAAAIHGDKSQSERDHVLNQFRTGRSPVLVATDVAARGLDIK
DIRVVVNYDFPTGVEDYVHRIGRTGRAGATGLAFTFFGEQDAKHATDLIKVLEGANQRVP
PELRDMSGRGGGMNRSRRWGSSGSGRGGRGDSGFGGRNNDSGYGGRGSDSGYSGRGSDAG
YGSRVGDSSYGGKGGWSASGRGGGRGSDYDSQRNDRARSPDRGSSWSDRFKNRDRSRSRS
RSPVRVPPNSNVSFHKAMMERGGGDSDRKGFNRDRSRSPVPYSKDRAPTGRERSPPYSFH
RSVMGQGRSSSPYRQQHAEEKVLRRSPNRSSPSSPGGGRSNNGTQKEWGGSHGDGKYGGS
SYNGEEEEGMIPDEEGMIGQDDGVYQNAD
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagcaactgcctcttcagttggtccgcggtatgcaccaccagaccctact
ttaccaaaaccatggcgcggtcttgtggatggaaagactgggtatctttatttttggaat
cctgaaactaatgttacccaatatgagcggccttcgagctcatctgcctcacctaagtat
tcttcttcggtgtctagttcctctgtccaggttcaacagtcatctcaagggcagcagcgt
ggtcgcagtcctgagttgggtgataggtatgataggaacagtggaggtgggtcaaacaat
gaaggtggattgcgcaactaccaggattcgaaaggtggaaattttagttctcataatgct
ccaaatgggatgcattctgctggaaatgttagttcctctatcaaaggtcaaggagcacca
gatactggagttgggttatctccagaggcttatcggcgtcggcatgaaattacagttact
ggtgatgatgttcctccaccacttacgtcattcagttcaagtggccttccctctgagatt
cttagagaggtacaaaatgctgggttctctgccccaactccaattcaggcacagtcgtgg
cctattgctcttcaaagtagagatatagttgcaattgctaaaacaggttcagggaagact
ctggggtatttaattccagcatttattcatctcaagcgcactggtaatgatccaagaatg
ggccccacagcattggtactatcaccaacaagggaactggcaacacagatacaagatgaa
gctgtgaagtttgggaaatcgtcgaaaattacttgtgcatgtttgtatggaggagcacca
aagggtcctcaattgagggatattgatcgtggagcagatattgtggtagccactcctggc
cgtttgaatgatattcttgagatgaggagaattactcttaaccagatttcttatctagtg
ctggacgaggcagacaggatgctggacatgggctttgaacctcaaattagaaagattgta
aatgaggtgcctgctcgtaggcaaactcttatgtatactgcaacatggcctaaggaggtt
aggaaaattgcagctgacctgctggtcaatcccgttcaggtgaacatcgggaatgtagat
gagcttgttgctaacaaatctattactcagcatgttgaagtattgacctacatggagaaa
cagagacgactggaaaatattttgcggtcacaggatcaaggatctaaaataattattttt
tgttctaccaagaaaatgtgtgatcaacttgctcgtaatcttgcacgccagtttggagct
gctgctattcacggggataaatcccagtctgagagggaccatgtcttgaatcaatttcgg
actgggaggtctcctgtccttgttgctacggatgttgcagctcgaggattggacattaaa
gacatcagggtggttgtcaactatgacttccctacaggagtggaagattatgttcatagg
attgggaggaccgggagagctggggccactggtttggcattcactttctttggggagcag
gatgctaaacatgctacagacctcatcaaagtcttggaaggtgcaaaccagcgagttcct
cctgaacttcgggatatgtcaggacggggtggtgggatgaatagatccagacgatggggt
tcttctggttctggccgcgggggacgcggtgactctggatttggtggaaggaataatgat
tctggatacggtggaaggggtagtgattctggatacagtggaaggggtagtgatgctgga
tatggtagcagagttggcgactctagttatggaggaaagggtgggtggtctgcttctggc
agaggtggaggtcgtgggtcagactatgattcacagaggaatgatcgtgctcggagtcct
gacagaggatctagttggagtgatcgcttcaaaaaccgtgatcgcagtcgtagccgtagc
cgtagccctgtcagggtcccaccaaattccaatgtcagctttcacaaagcaatgatggaa
cgtggtggaggtgatagtgatcgcaagggttttaatcgggaccgaagccgcagtcctgtc
ccctacagcaaggaccgggctcccactggtcgcgaacgttcccccccttacagttttcat
cgctctgttatgggacaaggtcgatcatcctccccatatcgacagcagcatgcagaggaa
aaagtattaagacgcagtcctaatcgaagttcaccatcctctcctggtggtggtagatcg
aacaatggtactcaaaaggagtggggagggtctcatggtgacgggaagtatggtggatct
tcctataatggagaagaggaggaaggcatgatacctgatgaagaaggcatgataggtcaa
gatgatggtgtatatcaaaatgcagactag
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