Arachis ipaensis: 107645348
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Entry
107645348 CDS
T04301
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
aip
Arachis ipaensis
Pathway
aip03440
Homologous recombination
aip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107645348
03460 Fanconi anemia pathway
107645348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107645348
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
107645348
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
107645348
FA (Fanconi anemia) pathway
Downstream FA components
107645348
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
Pex19
HBB
Motif
Other DBs
NCBI-GeneID:
107645348
NCBI-ProteinID:
XP_016204842
LinkDB
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Position
B06:complement(61868..72154)
Genome browser
AA seq
1260 aa
AA seq
DB search
MMSCKAEVKEKMNSAAKPNRRNGNHLPKNVYHIGGLQVEFPYQPYGSQFAFMGRVISTLD
RAQREGHCHALLESPTGTGKSLSLLCSSLAWQHRYKSQPKPPPPSEPLADPLVHGGGFLP
EDDAFSSPSDNPELAEAEPAKKIQKKKAAPTIYYASRTHSQISQVIRELRKTTYRVPMAV
LASRKHYCTNKNILGKENINEECKLLLKDQEIGCPEFKNAHKVKGHPSLQKGGCNEVHDI
EDLIKVGHSVKGCSYYAARNMSDDAQLVFCPYSYIINPVIRGAMDLDIKGAILILDEAHN
IEDITRDAGSVDIQEDDFDKLQMELQQLCSVNAAIYQPLYEMAQGLTSWIERKKNNLDKR
DFQHYVSCWTGDKALRELEEANISKQCFPILLECATKAIRIATDLETDKPHLSGMSVITL
EGLFSSLTYFFSRNGSHMLDYQLALQRCVRKDAVRAFGNWTHTFSLWCLNPAVVFRDVAD
LSLSIILTSGTLSPMSSFSSELGVQFETNLEAPHVIDICTQVWPAVISTGPGNYPLNASY
KTADGYAFQDAVGRSLEEIFNIVPGGCLVFFPSYKLMEKLCNRWTETGQWSRLNAKKPLY
VEPRAGGQDDFETTLKGYYDSIHHGKKLGARRKRRIKEVDSNHSHPVDSQEGFEKGGAAL
LGVCRGKVSEGIDFSDDNARVVVSLSILVNLHDIQVSLKKKYNDMYKSSKNLLSGSEWYC
HQAFRALNQAAGRCIRHKLDYGAIILLDERLREERSRAFISKWLRRNLKVYDNFELSIEG
LKSFFEDAKEWHAMNTVNVKQNLSLHTDGVNIKGQNKRFTRKKNQKLNKSCNGFEKEGSI
IEDHGSFPVLSCQDLVDSQPSAQGNSNKYNCEDHINPQICNLTEERFNRDLFVASTLGEC
SSIKETPCIDVNSDPGSPGFSKDDNSVSTIIEASAQFSNHLSSLSVCLPDGSKNSSGLHS
SVTVTPEKNIARNNVPETESPVNTSVNSHYQKRRKTMLSPFITEVENLNYITPCANTLMT
YTKSSLDVREEAHGIEHVWERNSKSNIPELPTSSLPGSCSLTFPLRDRRLQLFCLLCKNP
LGRPENDLYLMCSLISSSKVHLRTLLKQRTKAYATDTSNSIPVILTDSSFVDQRIRNRIP
GSALEQGIWCVEDGCVFSSVLCPFCSDRNNLLGVQIIATNSSNIQLLEKILFYYDSLEVK
SYEESASGVSKDVDLKPVNVNDRGMNGIAVLSSIDKYSYVPRPKISEQRLRGLPSEENQS
NT seq
3783 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtgcaaagcggaagtaaaggagaaaatgaactctgcagcaaaacctaaccgc
aggaatggcaatcatctcccgaagaatgtgtaccacatcggaggcctgcaggtggagttt
ccgtaccaaccgtacgggtcccagtttgcattcatggggagagtgatctccaccctcgac
cgggctcagagggaaggccactgccacgccttgctcgagtctccaactggcaccggcaag
tccctctccctcctctgttcctctctcgcctggcagcaccgttacaaatcccaacccaag
ccccctccgccttccgagccccttgccgatcctctcgtccacggcggcggctttcttccc
gaggatgatgccttttcttctccatccgataatccggagctcgcagaagccgaaccagcc
aaaaaaattcagaagaaaaaggccgctcctactatatattatgcctcgagaactcactca
caaatctctcaagtcattcgtgaactgcggaaaactacatacagggtgccgatggctgta
ttggcatcacggaaacattactgcaccaataaaaatatacttggcaaagagaacatcaat
gaagaatgtaaactacttctgaaagaccaggagatagggtgtccagaattcaaaaatgca
cataaagtcaaaggacatccctctcttcagaaaggaggatgtaatgaggtgcatgacata
gaagatcttataaaagttggacattcagtgaaaggttgctcctattatgctgcacgtaat
atgtcagatgatgcgcagctggtattttgtccttatagctacatcattaatcctgtcatt
cggggagcaatggacttagatattaaaggagctatactgattcttgatgaagctcacaat
atagaggacatcactcgagatgctggcagcgtggatattcaagaggatgattttgataaa
ctgcaaatggagctccagcaactatgttctgtaaatgctgcaatataccaaccactatat
gaaatggcacagggtcttactagttggatagaacggaagaaaaataacctagacaagcgt
gattttcagcactatgtgtcatgttggactggtgacaaggcattgagagaacttgaagaa
gcaaatatatcaaaacagtgcttcccaatcttactagaatgtgctactaaggcaatcaga
attgctacggacttggagacagataagccacatttaagtggcatgtcagtgataacattg
gaaggtttattctcatcactaacttatttcttctcaagaaacggatctcacatgttggat
taccagcttgctctgcagcgatgtgttagaaaagatgctgtaagagcttttggaaactgg
acacacactttcagcttgtggtgcttgaatccagctgttgtgtttagagatgttgctgat
ctttctttatcgattatcttgacttctgggactctatcgccgatgagttccttttcttct
gagcttggagttcagtttgaaactaatcttgaagccccccatgtaattgacatttgcaca
caggtgtggcctgctgtaatctccactggtcctggtaattatcctttgaatgcaagttat
aaaacggcagatggatatgcctttcaggatgcagttggaagatctttagaagaaatcttc
aacattgttccaggtggatgtcttgtgttcttcccaagttataaattgatggagaaatta
tgcaaccgttggactgaaacaggtcaatggtctcgactaaatgcaaaaaagcccctttat
gttgaaccacgagctggaggccaagatgattttgagactaccttaaaagggtattatgac
tcgattcatcatgggaaaaagcttggtgcgcgaaggaaaagaaggattaaagaagttgat
tcaaatcactcccatccggttgattcccaagagggttttgagaaaggaggagctgcttta
cttggtgtttgccgtggaaaggtttccgaagggattgatttctctgatgataatgccaga
gtagttgtatccttatctatacttgtaaacttacatgatattcaagtttctctaaagaaa
aaatataatgatatgtacaaatcatccaaaaatcttctcagcggaagtgagtggtattgt
caccaagcattccgtgctttaaatcaagcagcagggcgttgtatacgacataagcttgac
tatggggcaataatccttttggatgaacgtcttcgtgaagaaagaagtagagcattcatt
tcgaagtggctaagaagaaacctaaaggtttatgacaacttcgaattatcaatagaagga
ctaaaatcattctttgaggatgccaaggaatggcatgcaatgaatacagtgaatgtcaaa
cagaatttgagcttacataccgatggtgtcaatatcaagggtcagaataagagattcaca
agaaagaaaaatcagaaacttaacaaatcttgcaatggatttgagaaagaagggtcaatt
attgaggaccatggctcttttcctgtactaagctgtcaagatcttgttgacagtcaacca
tcagctcaagggaatagtaacaaatacaattgtgaagaccatataaacccacaaatctgt
aatctgacggaggaaaggttcaatcgggacttatttgttgcatccacgcttggagaatgc
tcctccatcaaggaaaccccttgtatagatgttaacagtgatccaggtagccctggtttc
tctaaggatgataactctgtttccaccataattgaggcctctgctcaattttcaaatcac
ttatcaagcttatcagtgtgtttacctgatggaagtaaaaattcctcagggcttcactct
tcagtaactgttactcctgaaaagaatatagctagaaataatgttcctgaaacagaatca
cctgtgaatacaagtgttaattctcactaccagaaaaggaggaagaccatgctctcacca
tttatcacagaggtagaaaatttaaattatattacaccttgtgccaacactcttatgaca
tacacaaaaagctcattggatgttagagaggaagctcatggaattgaacatgtttgggag
agaaattcgaagtcaaatattcctgagttaccaacaagtagtctacctggttcatgttcg
ttaactttccctttacgggatagaaggttacaacttttttgtttactctgcaaaaaccca
ttgggccgacctgaaaatgatctgtatctcatgtgttccttgatttcctcatcaaaagtc
cacttaagaacccttttgaaacagagaacgaaagcttatgctactgatacatcaaatagt
atacccgttattttaaccgattcttcatttgttgatcaacgtatccgcaatagaatacct
ggcagtgcactggaacagggtatttggtgtgtggaagatgggtgtgtcttcagctctgtt
ctctgccccttctgcagtgaccgcaacaatttactaggagttcagatcattgcaaccaat
tcatcaaatattcagttacttgaaaagatactgttttactatgattctttagaggtgaag
agctatgaggaatcagcgtctggtgtttccaaggatgtggatttgaagccagttaatgtg
aatgatcgaggcatgaatggaattgctgtgttaagttccattgacaagtattcttatgtt
ccccggccaaagatttcagaacagagactaaggggcttgccttctgaggaaaaccaaagt
tga
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integrated database retrieval system