Arachis ipaensis: 107645367
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Entry
107645367 CDS
T04301
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
aip
Arachis ipaensis
Pathway
aip03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107645367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107645367
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107645367
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
107645367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
RRP40_S1
ECR1_N
EXOSC1
S1
Motif
Other DBs
NCBI-GeneID:
107645367
NCBI-ProteinID:
XP_016204863
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All DBs
Position
B06:2974332..2976939
Genome browser
AA seq
320 aa
AA seq
DB search
MRGLQLPLSQTQKVRLQNALQQLESLSSKVNSDASVTVADSISVNHEEGVLKGHGTADIN
GDLVATLCGVVERVNKLVYVRALRSRYKPEVGDIVIGRVVEVSQKRWRLEINYSQDAVLM
LSSMNMPDGVQRRRTAVDELNMRSIFEEKDVVCAEVRGFQRDGLHLQARSQKYGKLNRGQ
LLTVPPYLVKRQKQHYHHLEQYGVDLILGCNGFIWIGEHIEAKDDMVEDQVSHSNRNSAS
LEEQEKNYTALETRKYICRAANAIRVLSTLGFNMTLEIIKGVIDLSLSLNLDIHDMLGSE
FYVQVAEKEAERRSSSKKKR
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgagaggattacagttaccgttgagccaaactcagaaggttcgtctccagaacgctctg
cagcagctggagtcgctctcctccaaggtcaactccgatgcctccgtcaccgtcgccgat
tccatttctgttaaccacgaggaaggcgtcctcaagggccacggaaccgcagacatcaac
ggcgacctcgttgccaccctctgcggcgtagttgagcgcgtcaataagctcgtctatgtc
cgcgccctgcgatccaggtacaaacccgaagttggagacatcgtcattggacgtgttgtc
gaggtttctcaaaaacgttggaggttggagataaattacagtcaagatgcagttttgatg
ctttcttctatgaatatgcctgatggtgtccagagacggcggacagctgtggatgaacta
aatatgcgttcaatttttgaagagaaggatgttgtttgtgctgaagttcgtggtttccag
cgtgatggcttacatcttcaggcaagaagtcagaaatatgggaagcttaacagaggtcaa
ctgctaacagtcccaccttacttagttaagaggcaaaagcaacattatcatcatcttgag
caatatggtgttgatttgatacttggatgtaatggattcatatggattggagaacatatt
gaagccaaagatgacatggtagaagatcaagtgagccattccaatagaaattcagcaagt
cttgaagaacaagagaaaaattatacggcattggaaacaagaaaatacatatgcagggct
gctaatgctattagagtattatctactttgggtttcaatatgacattagaaatcatcaag
ggagttattgatttaagcctttctctaaatcttgatatacatgatatgcttggttcggag
ttctatgttcaggttgctgaaaaagaggctgaaaggagaagctcaagtaaaaagaagagg
tag
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integrated database retrieval system
