Arachis ipaensis: 107645501
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Entry
107645501 CDS
T04301
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
aip
Arachis ipaensis
Pathway
aip03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107645501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107645501
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
107645501
Prokaryotic type
Archaeal type
TFB
107645501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Ribosomal_S27e
DUF7573
WHD_GDS1
HTH_78
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
107645501
NCBI-ProteinID:
XP_016205030
LinkDB
All DBs
Position
B06:5046979..5051524
Genome browser
AA seq
312 aa
AA seq
DB search
MSDAFCSDCKRQTEVVFDHSAGDTVCSECGLVLESHSIDETSEWRTFANESGDNDPVRVX
XPTNPLLADGGLSTVIAKPNGASGELFSSSLGRWQNRGSNPDRGLILAFKTIATMSDRLG
LVATIKDRANEIYKRVEDQKSSRGRNQDALLAACLYIACRQEDKPRTVKEICSVANGASK
KEIGRAKEYIVKQLGLEKGQSVEMGTIHAGDFMRRFCSNLGMNNQAVKAAQEAVQRSEEF
DIRRSPISIAAAVIYIITQLSDDKKALKEISLATGVAEGTIRNSYKDLYPHVSKIIPNWY
AKEEDLKNLCSP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgcgttttgctccgactgcaagcggcagacggaggtggttttcgaccactcc
gccggcgacaccgtctgctccgagtgcggtctcgttctcgagtcccactccattgacgag
acctcggagtggaggacctttgctaacgagtccggggataacgatccggttcgtgtnnnn
nnncccactaacccgctccttgccgacggtggccttagcactgtcatcgccaagcccaac
ggcgccagcggcgagttgttctcgtcttcccttggccgctggcagaaccgtggctctaat
cctgatcgcggtctcatcctcgctttcaagacaatcgccactatgtccgataggttggga
ctcgtcgcaaccatcaaggatcgagctaatgagatatacaagcgggttgaagatcagaag
tctagtagaggaagaaatcaggatgcattattggctgcttgcctctacattgcttgtaga
caggaggacaagccacgcactgtaaaggaaatttgctctgttgccaatggagcgtcaaag
aaggaaattggccgagcaaaagaatacatagtgaaacaactgggtttggagaaaggtcaa
tctgtggagatgggaacaatacatgctggtgactttatgaggcgattttgttctaatctt
ggtatgaataatcaagctgtcaaagctgctcaagaagctgttcagagatcagaagagttt
gatatacggcggagtcccatatcaattgctgcagcagtgatatacatcataactcagctg
tcagatgataaaaaagctctcaaagaaatatcattagccacaggagttgcagaaggaacc
attaggaactcgtacaaggatctttaccctcatgtttcaaaaataataccaaactggtat
gcaaaggaggaagatttgaagaacctttgcagcccttga
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