Arachis ipaensis: 107645519
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Entry
107645519 CDS
T04301
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aip
Arachis ipaensis
Pathway
aip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107645519
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aip03041
]
107645519
Spliceosome [BR:
aip03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107645519
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
PRP4
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_SCAP
WD40_RFWD3
WD_LRWD1
Beta-prop_Nup120_160
eIF2A
WD40_like
Beta-prop_SPT8
GTP-bdg_M
Motif
Other DBs
NCBI-GeneID:
107645519
NCBI-ProteinID:
XP_016205053
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Position
B06:5329982..5332995
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AA seq
585 aa
AA seq
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MEVDEENVPSNTASESAIGPSSDVSVNAATPPHPIQPIIPPPVIPLSAPVPPMAPIPTIP
PPSIVPPIAPIPAPPVVRPLAPLPPRPPPIRPPVAQNGEVGSEDSDSDNDDAGGRVNQGA
GEYEISEESRLVRERQEKAMQELMMKRRAAALAVPTNDMAVRARLRRLGEPITLFGEREM
ERRDRLRMIMAKLDADGQLEKLMKAHEDEETAATAGKDGDEEEIQYPFYTEGPKSLRDAR
IDIAKYSLVRAALRLQRARRRKDDPDEDVDAEMDWALKQAANLSLEFSEIGDDRPLSGCS
FSRDGKSLATCSLTGAAKLWSMPKVIKSCTLKGHTERATDVAYSPVHNHLATASADRTAK
YWNDQGSLLKTFEGHIDRLARIAFHPSGKYLGTASFDKTWRLWDIETGEELLLQEGHSRS
VYGLAFHQDGSLAASCGLDALARVWDLRTGRSILALEGHVKPVLGISFSPNGYHLATGGE
DNTCRIWDLRKKKSMYTIPAHSNLISQVKFEPQEGYFLVTASYDMTAKVWSARDFKPVKT
LSGHEAKVTSVDVLGDGSYIATVSHDRTIKLWSTNMSSEQTMDVD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggaagtggatgaagaaaatgttccatcaaatactgcttctgaatccgccataggacct
tcctctgatgtttccgtcaatgctgcaactccaccacacccaattcaacccattattcca
ccacccgttattcctctttctgcgcctgtgccacctatggctccaattcccaccattcct
cccccttctattgtgcctcccatagccccaattccggcccctcctgtggtgcgtccattg
gcgccgctccctcctcgcccgccgcctattagaccacctgtggcgcaaaatggcgaggtt
ggttcggaagattctgattcggacaacgatgatgccggtgggagggttaaccagggtgcc
ggggagtatgagatatcggaggagagtaggctggtgagggagaggcaggagaaagcaatg
caggagctcatgatgaagaggcgtgccgccgctttggctgttccgaccaatgacatggct
gtgcgtgctcgccttcgccggcttggtgagcccataactttgtttggtgagagggagatg
gagaggagggacaggttgaggatgattatggcgaagctggatgccgatggccagctggag
aagctgatgaaggctcatgaggatgaagagactgcggctactgccgggaaggatggggac
gaggaagagatacagtatcccttttacaccgaagggccaaagtctctccgtgatgctagg
attgatattgctaagtattctttggttagggcagcattgcgtcttcaacgtgcccggaga
agaaaagatgatccggatgaagatgtggatgcggagatggattgggcattaaagcaggct
gctaatttgagtcttgaattcagtgaaatcggagatgatcgaccgctttctggttgctcc
ttctcacgagatggaaagtcgcttgctacttgttctctaaccggagctgccaagttgtgg
agcatgcctaaagtcatcaaatcttgtaccttaaagggacacacagagcgtgcgactgat
gttgcttattctcctgtgcacaaccatttagcgactgcatctgctgatcggaccgcaaaa
tattggaatgaccagggatctttactgaagacattcgagggtcatattgaccgtcttgca
cgaattgctttccatccatcaggaaagtacctaggcactgctagctttgacaagacatgg
agattatgggacatagaaacaggtgaggaattgcttcttcaagaaggtcacagtaggagt
gtatatggtttagctttccatcaagatggatcgttagctgcatcttgtggactggatgct
ttggctcgtgtttgggatctccgaactgggcgaagcattcttgcacttgaaggtcatgtc
aagccggttcttggcattagcttttcacctaatggatatcatttagccacaggcggtgaa
gacaacacttgtcgcatttgggatttgagaaagaagaaatccatgtacaccatccctgct
cactccaacttaatatcacaagttaagtttgagcctcaggaaggttactttttggtaact
gcctcatatgacatgacagctaaggtgtggtcagcccgtgatttcaagcctgtgaagacg
ctatctgggcatgaagcaaaagttacttctgtggatgttcttggtgatggcagttatatt
gctactgtctcacatgatcgtaccataaaattgtggtccaccaatatgagtagtgaacaa
actatggatgttgattag
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