Arachis ipaensis: 107645995
Help
Entry
107645995 CDS
T04301
Name
(RefSeq) phytochrome A isoform X1
KO
K12120
phytochrome A
Organism
aip
Arachis ipaensis
Pathway
aip04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107645995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HATPase_c
PAS_9
HisKA
PAS_4
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
107645995
NCBI-ProteinID:
XP_020959614
LinkDB
All DBs
Position
B06:10971476..10975712
Genome browser
AA seq
1125 aa
AA seq
DB search
MSSSRRSQSSSNSSRSRQSARVIAQTSVDAKLHANFEESGSSFDYSNSVRLSSGTASGEK
QARCDRVTAAYLHQMQKGKFIQPFGCLLALDDKTLRVIAYSHNASEMLTMVSHAVPSVGD
HPALAIGTDIRTIFTPSSAAALQKALAVPEVSLLNPILVHCKTSGKPFYAIVHRITASLI
IDFEPVKPHEVPMTAAGALQSYKLAAKAITRLQSLPSGSMETLCDTMVQEVFELTGYDRV
MAYKFHEDDHGEVIAEVAKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIVDCRAKHVK
VLQDPKVSIDLTLCGSTLRAAHSCHLQYMENMNSIASLVLAVVVNDNDEDGDGSDVVQPQ
KRKRLWGLVVCHNTTPRFVPFPLRYACEFLAQVFAIHVNKELELEYQIVEKNILRTQTLL
CDMLMRDAPLGIVSQSPNIMDLVRCDGAALLYRDKVWRLGVAPSESHIRELALWLSKCHK
DSTGLSTDSLSDAGFPGAAALGDVVCGMAAVRISSMDIVFWFRSHTAAEIRWGGAKHEPG
DRDDPTKMSPRSSFKAFLEVVKGRSLPWKDYEMDAIHSLQLILRNSFKDNEIMDISTQAI
DTRLNDLKIEGMQELEAVTSEMVRLIETASVPILAVNVDGMVNGWNTKIAELTGLSVEEA
IGKDLLTLVEDFSVERVKKMLDMALQGKEEKNFQFEIKTHGVKIDSGPISLVVNACASRN
LQNSVVGVCFVAHDMTAEKTVMDKFTRIEGDYRAIVQNPNPLIPPIFGTDEFGWCCEWNS
AMTKLTGWKREDVMDKMLLGEVFGTHMACCRLKNQEAVVNFGIVLNNAMTGVETEKAAFG
FFTRKGKYVECLLSVSKKLDVEGEVTGVFCFLQTASPELQQALHIQRLSEQTALKRLKAL
TYMKRKIRNPLCGIVFSRKLLENTELGIEQKQLLDTGTQCQRQLSKILDDSDLDRIIDGY
LDLEMVEFTLHQVFVACLSQVMTKSKAMGIHIINEVTEHIMTETLYGDSLRLQQVLADFL
LICINFTPTGGQVVVAASLTKDQLGKSVHLANLEISITHDGVGVPETLLNQMFGRDGQES
EEGISLLISRKLLKLMNGDVRYLREAGKSSFILTVELAASQKLIA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcgaggcgaagccaatcatcgagcaattcaagcagatcaagacagagtgca
agagtaattgctcagacaagtgtggatgcaaagctgcatgcaaactttgaggagtccgga
agttcattcgactactcgaattcggtgcggttgtcttccggtacagccagtggagaaaag
caagcaaggtgtgacagagttacagcagcttatcttcatcaaatgcagaaggggaagttc
atccagccctttgggtgcttgctagctttggatgacaagacacttagggtcattgcatac
agtcacaatgcatctgaaatgcttaccatggtcagccatgctgtcccaagtgttggtgat
caccctgctcttgccattggcaccgacattcggactattttcacgccctcaagtgctgct
gctttgcaaaaggcccttgcagttccggaggtttcgcttcttaaccccattctagttcat
tgcaagacttctggcaagcccttctatgcaattgttcatcgtattaccgctagtttgatc
attgattttgagcctgttaagcctcatgaagttcccatgactgccgccggagcgctgcaa
tcttacaagcttgcggccaaagcaataactagattgcagtctttgcccagtgggagcatg
gaaacgctttgtgacaccatggttcaagaagtttttgagctcacgggttatgacagggtg
atggcttataaatttcatgaggatgatcatggggaagtgattgctgaggttgcaaaacca
ggccttgagccatatctgggtttgcactatccagcaactgatatcccccaggctgcgcgc
ttcttgtttatgaaaaacaaggtccgaatgatagttgattgtcgtgcaaagcatgtgaag
gtgcttcaagaccccaaagtttccattgacttaactttgtgcggttcaactttaagggct
gctcatagttgccacttgcaatatatggagaatatgaattcaattgcttccctggttttg
gcagttgtggtcaatgataacgatgaagatggggatggctctgatgttgttcagccacaa
aagagaaagagactttggggtttagtagtttgccataacactactccaaggtttgttccc
tttcctctaaggtatgcttgtgaatttttggctcaagtatttgccatccatgtgaataag
gaattagagttagaatatcagattgttgagaagaatatcctgcgcacgcagacactcttg
tgcgatatgctgatgcgagatgcaccccttggtattgtatcacagagccctaatataatg
gatcttgtgagatgtgatggagcagcactcttgtatagagacaaggtatggagattaggt
gtggctccaagtgaatctcacataagagagttagctttatggctctctaagtgccacaag
gactccacgggtttgagtacagatagcttgtctgatgcaggcttcccaggagctgctgct
cttggtgatgttgtttgtggaatggcagctgtgagaatttcttccatggacatagttttc
tggtttagatcacacactgctgcagaaatcagatggggtggtgccaagcatgaacctggt
gacagggatgatcctacaaagatgagtccaagatcatcattcaaggctttccttgaagtt
gtgaagggaaggagcttaccatggaaggactacgaaatggatgctatccattcattgcag
ctaatactgagaaattcgttcaaagataatgagattatggatataagcacgcaagctatt
gatacaagactaaatgatttgaagattgaagggatgcaagaactagaagcagtgacgagt
gagatggttcgattaattgaaacagcatcagtgccaattttggcagttaatgttgatggg
atggtcaatggatggaacacgaagattgctgagttgacaggcctttcagttgaggaagcc
attggaaaggatttacttacgctggttgaggatttttcagtagagagagtcaagaagatg
ctggacatggcactgcagggtaaagaagagaagaatttccaatttgagatcaaaacacat
ggtgtgaagattgattcaggtcctatcagcttggtagttaatgcttgtgcaagcaggaat
ctccaaaacagcgtggtgggagtttgttttgtggcccatgatatgactgctgagaagaca
gtcatggacaaattcactcgaattgaaggtgactatagggcgattgtacagaatccgaac
cctttgatccccccaatatttggcacagatgaatttggctggtgttgtgaatggaattca
gccatgacaaagttaactggatggaagagagaggatgtgatggataaaatgctattaggg
gaggtttttggaacccatatggcttgttgccgtcttaagaatcaagaagctgttgttaat
tttggaattgtacttaacaatgccatgactggtgtggaaacagagaaagctgcttttggt
ttcttcactcggaagggcaagtatgtagaatgcttgctttctgtgagcaagaaattggat
gtagagggtgaagttactggagtcttctgcttcttacagacagctagccctgagcttcaa
caagcattgcatattcagcgtttgtccgaacaaactgcattgaagagactcaaagcttta
acttatatgaaaaggaaaattcggaatcctttgtgtgggattgtgttctctcgaaaattg
ttggagaatactgagttgggaattgagcaaaaacaacttctggacactggcactcagtgc
caacgccagcttagcaaaattctcgatgactcggatcttgaccgtatcattgatggctac
ttggatttggaaatggttgaattcactctgcatcaagtttttgttgcctgcctaagtcag
gtcatgacaaagagcaaggcaatgggtatccatataatcaacgaagtcacggagcacatc
atgacagaaaccttatatggtgatagtcttaggctgcagcaagtcttggctgacttctta
ttgatttgcatcaattttacgccaaccggaggtcaagttgttgttgcagcctctttaacc
aaagatcaattaggcaaatcagttcatttggctaacttggagataagcataacacatgat
ggtgttggtgttccggaaacattgctgaaccaaatgttcggacgagacggacaagaatcc
gaggagggtattagtctgctcatcagcagaaagttgctgaagctgatgaatggagacgtg
cggtatctgagggaagctggcaaatcatctttcatcttaacagttgaactggctgcttcc
cagaaattgattgcttaa
DBGET
integrated database retrieval system