Arachis ipaensis: 107646001
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Entry
107646001 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 3, chloroplastic
Organism
aip
Arachis ipaensis
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
GUCT
ResIII
zf-CCHC
CMS1
AAA_30
YgbB
ERCC3_RAD25_C
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107646001
NCBI-ProteinID:
XP_016205657
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Position
B06:complement(10900260..10905275)
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AA seq
770 aa
AA seq
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MASLIGVSSIYQTPSTTLDLHKRPPLTTTTSSSSLSLQCLDSKSHFNNVRRAHLSTNNGK
GGFKPTVSFVTSAIATPNSSVLSEEAFKGIGSGDDFPDDDDFAGFGSETDEGSSAVSSEE
LDVSKLGLPSRLVDSLLKRGISHLFPIQRAVLVPALEGRDIIARAKTGTGKTLAFGIPII
KGLTEDEHSSSLRRSGRLPRVLVLAPTRELAKQVEKEIKESAPYLSTVCVYGGVSYVTQQ
SALSRGVDVVVGTPGRIIDLINGNSLRLNEVQYLVLDEADQMLAVGFEEDVEVILEKLPS
ERQSMLFSATMPSWVKKLARKYLDNPLTIDLVGDEEEKLAEGIKLFAISATATSKRTILS
DLISVYAKGGKTIVFTQTKRDADEVSLALTNSIMSEALHGDISQHQRERTLNGFRQGKFT
VLVATDVAARGLDIPNVDLIIHYELPNDPETFVHRSGRTGRAGKQGTAILMYTSSQRRTV
RSLERDVGCKFEFISPPGIQEILEASAEQVVATLNRVHPESVEFFTPTAQKLIEEQGTSA
LAAALAQMSGFSRPPSSRSLINHEQGWVTLQLIRDSDSRRYFSARSVTGFLAEVYSPAAD
EVGKIHLIADERVQGAVFDLPEEIAKELLNREIPPGNTITKVTKLPALQDDGPPGDFYGK
FSDRDRSSRRGSGSGSRDRRGGFRSSRGYGGRDSDDDFGDSYRRGSRSNNKTGSSWSRAG
RSSGDDWPIGGRRSSGRSSSSDRGGFGGSCFNCGESGHRASDCPNKRSFF
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgattggagtttcttccatataccaaactccctctacaactctcgaccta
cacaaacgaccaccgcttactactactacttcttcttcctctctttccttgcaatgcttg
gacagcaagtcccacttcaacaacgttcgcagagcacacctttctactaacaatggcaag
ggaggttttaagcccactgttagttttgttacttctgccattgccactccaaattcttcg
gtcctcagcgaagaagcattcaaggggataggcagcggtgatgacttccccgacgacgat
gactttgccggctttggctctgaaaccgacgagggatcttctgctgttagctctgaagaa
ctcgacgtttccaagcttggccttccttcgcgcctcgttgattccctcctcaagcgtggg
atttcgcatcttttccccattcagagagcggtgttggtaccggcattggaaggtagggat
atcattgctcgggcaaagactgggactggcaagacactagcatttgggattcccattatt
aaaggccttactgaagatgaacattcaagttctctcaggcggtctggtcgcctccccaga
gtgttggttcttgcacctaccagggagttagcaaagcaagtagagaaggagataaaggaa
tctgcaccttatctgagcacagtttgtgtttacgggggtgtttcctatgttactcaacaa
agtgcgctttcacgtggagttgatgtagttgttgggacgcctggtagaataattgaccta
atcaatgggaacagccttagactgaatgaagttcagtacctggtcctcgatgaagcggat
cagatgcttgctgttgggtttgaggaggatgtggaagtaatattggaaaagctcccatca
gagaggcagagcatgcttttttctgcaactatgccaagttgggtaaagaaattggctcga
aagtatttggacaatccattgacaatagatctggttggcgatgaagaagaaaagctcgca
gaagggataaaactttttgctatatcagcaactgccacttcaaagcgaacaattctttcc
gatcttataagtgtttatgctaagggtgggaagactatagtttttacgcagacaaaaaga
gatgctgatgaagtatcattggcattaacaaatagtataatgtctgaagcattacatggt
gatatatctcagcatcaaagagagagaacattgaatggttttcgacaaggaaaatttaca
gttcttgttgccactgatgttgcagcccgtggacttgatattcctaatgttgatttgatt
attcattatgagcttcccaatgatccggagacttttgtgcatcgctctggtcgtactggg
cgtgcagggaaacaaggtactgctattcttatgtacaccagtagccagaggagaacagtt
agatctctagagcgtgatgtaggctgcaaatttgaattcatcagtccacccggtatacaa
gagattttggaggcatctgctgagcaagttgttgccacgctcaatagggttcatcccgag
tctgttgagttttttacaccaactgcacaaaaattgattgaagaacagggaacaagtgcc
cttgcagctgcactagcacaaatgagtggattctctcgtcctccatcgtcccgatcttta
atcaaccatgaacagggatgggttacattgcagttgatccgagattcagatagtagaaga
tacttctccgcaagatcagtcactgggtttctggctgaggtttattctccagctgctgat
gaagttggaaaaatacatttaattgcagatgaaagggttcaaggggctgttttcgatctt
ccagaggaaattgctaaagagttacttaacagggagataccacctggaaacactataacc
aaggttaccaagttgcctgccttgcaagatgatgggccaccaggtgatttctatgggaag
ttctctgacagagatcgtagtagccgaagaggttcaggttctggttctagggatcggaga
ggcggttttagaagctcacggggatatggaggccgagactctgatgatgattttggtgat
tcatataggagaggcagtagaagtaataataaaactggcagtagctggtctcgagctgga
agatccagtggtgatgattggccaattggcggtagacgatcatcaggcagatcttcatcg
tcagacagaggtggttttggagggtcctgttttaattgtggggagtctgggcatcgagca
tcagattgtccaaacaagcgcagcttcttttag
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