Arachis ipaensis: 107646233
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Entry
107646233 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 16 isoform X1
KO
K14810
ATP-dependent RNA helicase DDX56/DBP9 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aip03009
]
107646233
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107646233
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
Pre-60S particles
Helicases
107646233
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
ODC_AZ
Motif
Other DBs
NCBI-GeneID:
107646233
NCBI-ProteinID:
XP_016205918
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All DBs
Position
B06:154354..180853
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AA seq
462 aa
AA seq
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MAATTTENVLKETVQRYEEDASDDKSFEELGVDARLIRALLKKGIDKPTPIQRVAIPLIL
EGKDVVARAKTGSGKTFAYLLPMLQKLFANVDRKKQAPNAFVLVPTRELCQQVYAEVVSL
IELCRVQLKVAQLNSNMQASDLRAALTGPPDILISTPACLAKCLFDGVLQPASINATLET
LILDEADLLLSYGYENDIKSFTPHLPRSCQCLLMSATSSTDVDKLKKLILHNPFILTLPE
VGNNKDDVIPKNVQQFWISCPANDKLLYTLAVLKLELVQKKVLIFTNDIDMSFRLKLFLE
KFGIKSAVLNAELPQNSRLHIIEEFNAGLFDYLIATDVSQSKEKDEAPKEGKGSRKSRKH
KLKLDSEFGVVRGIDFKNVFTVINFDMPRSVAGYVHRIGRTGRAYSSGASISLVSTDEME
TLEEVKAFVGDDENKGSNTIVEFPFLTKNAVESLRYRAECIG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacaacaaccgaaaacgtattgaaagaaacggtgcagcgatatgaagaagac
gcaagcgacgataagagcttcgaggagctcggtgtggacgctcgtctcattcgtgccttg
ctcaagaaaggaatcgacaagcccacaccaattcagagagtcgctattccactcattctg
gaaggtaaggatgtggttgctcgtgcgaagacaggttctgggaagacgtttgcttacctt
ctccccatgctacagaaactattcgctaatgttgatcgcaagaagcaggcacccaatgct
tttgttcttgttccgactcgcgagctgtgtcaacaggtctacgcagaggttgtgtcactc
attgagttatgccgagttcaactgaaagtcgcccaattgaatagcaatatgcaagcttct
gatctgcgtgcagctctgactggacctcctgatattttgatatccacacctgcttgccta
gcaaagtgcttgtttgatggtgtacttcaaccagcttccattaatgctacgcttgaaact
ctaattcttgatgaggcagatcttctgttatcatatggatatgaaaatgatataaaatct
tttacgcctcatttacccagaagttgccagtgtcttcttatgtccgcaacatcaagtact
gatgttgacaaactaaagaagttgattctacacaatccattcattttgactttgcctgaa
gtgggaaataataaggatgacgtcatcccaaaaaatgttcagcagttctggatctcgtgc
cctgccaatgataaattgctctacacccttgctgttttgaagttggagttagtgcaaaaa
aaagttctgatattcactaatgacatagacatgagtttcagattgaaattgttcctagaa
aagtttgggattaagtctgctgttttaaatgctgagttgccacagaattcccgactccat
attattgaggagttcaatgctggtctgtttgattatcttattgcaactgatgtcagtcag
tcgaaggagaaggatgaagcacctaaagaaggcaaaggatcacgaaagtctaggaaacat
aaacttaaactcgattctgaatttggagtagtaaggggaattgatttcaaaaatgtattc
acggttataaactttgatatgcctcgaagtgttgcaggatatgtacatcgaattggacgt
acaggaagagcatatagttctggtgcttctatttctctggtttcaacagatgagatggaa
acattggaagaagtaaaagcttttgttggtgatgatgaaaacaagggctcaaacacaatt
gtggagtttcctttcctcaccaagaatgcagttgaatctttgcggtatagggctgagtgc
attgggtag
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