Arachis ipaensis: 107647352
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Entry
107647352 CDS
T04301
Name
(RefSeq) protein CLP1 homolog
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
aip
Arachis ipaensis
Pathway
aip03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107647352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107647352
Enzymes [BR:
aip01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
107647352
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
107647352
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
CLP1_N
nSTAND3
AAA_24
CbiA
AAA_22
MMR_HSR1
DUF1611
Motif
Other DBs
NCBI-GeneID:
107647352
NCBI-ProteinID:
XP_016206916
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All DBs
Position
B06:complement(112479096..112486618)
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AA seq
287 aa
AA seq
DB search
MVAVGILATVTVVIAREKESPRSREKRKCCLRCCLHRDRSAAATARGVTLLNGNAEIFGT
ELAPEIWLNFPPRLKFAVFTWYGATIEMEGTTETDYTADETPMVSYVNVHAILEARRTRA
KASSSGDSESSQGPRVIVVGPTDFGKSTLSRMLLSWAAKQGSKPTFVDLDIGQGSITIPG
CIVATPIEMPIDPVEGITLEIPLVYFFGHTTPSNNVELYKVLVKELGGMLERQFAGNTES
RASGIVINTMGWIEGVGYDLLLHAIRTLKANVVLVLGQVEIYLIFIQ
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggtggcggtgggtatccttgccaccgtcaccgtcgttatcgcacgagagaaagagagc
ccgcgctcgagagagaaaaggaaatgctgtctgcgttgctgcctccatcgcgaccgatcc
gccgccgctactgctaggggtgttacacttctcaatggaaatgccgagattttcggcact
gagcttgcacccgaaatttggctcaacttccctccccgactcaaattcgctgtttttact
tggtatggtgctaccattgaaatggaaggtactactgaaactgattatactgctgatgag
acaccaatggttagctatgttaacgtgcacgctatattagaagccagaagaactcgtgct
aaagcttcatcctctggtgattctgaatcttctcaggggcctagagtgattgttgtagga
cctactgacttcggaaagagtaccttgtcgaggatgcttcttagctgggcggctaagcag
ggttcaaagcctaccttcgttgacttggatattggacagggatctataacaattcctgga
tgcattgttgctactccaattgaaatgcccattgaccctgttgaaggaattactcttgag
attcctcttgtttacttttttggccatacaactccaagtaacaatgtagaattgtataaa
gtgctagtcaaggaacttggggggatgctagagagacaatttgctggaaataccgaatct
cgtgcttcgggcatagtgataaataccatggggtggatagagggagtaggctatgatttg
ctattgcatgcaattcgtacacttaaggccaatgttgtcttagttttgggtcaggtagaa
atctaccttatctttatccaatag
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