Arachis ipaensis: 107647611
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Entry
107647611 CDS
T04301
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aip
Arachis ipaensis
Pathway
aip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107647611
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aip03400
]
107647611
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
107647611
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SR-25
Helicase_C_2
New_glue
Motif
Other DBs
NCBI-GeneID:
107647611
NCBI-ProteinID:
XP_020960645
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All DBs
Position
B06:complement(124498528..124503842)
Genome browser
AA seq
1323 aa
AA seq
DB search
MVIVNGVASRTRSKKKERSLNPSPCIGSGSRTLSSSSSKSSERKKGKRKAEVDVEVVEFD
YEAFHERWMMEPQQPLEMPPPRDVIELSDDSDDNAAAEGLQKLHRGYVNEEKKEEVQERN
VFPIDGAGTSANDPIIVGLSDSSSSDEGSEGGGRSLDWDFGLSSESEDTDNSDDEDFRVE
DEGEGSASASASASTSASSSDDSGSSSFDDEDEEEEKEKRRCKRRKKEKKRREPTFESHS
NKVLRCDEVIVETECSGICKKNGENKNNSSSTENNVFDHQPEKMLPKDADCASVLFGERN
TEGCSSEKNEDKEKNVAKKPVEVCSSKKNEDKEENVAKKPVEGCSSKKNADCASVLFGDR
NTEGCSSEKNEDKEAKKPAEGCSSKKNEDKEKNVAKKPVEGCSSKNNEDKEKNVAKKPVE
GCSSKKNEDKGKKVAKKPMPAGNRARKRVERTGENVGADIEASSQKRSRPSTPEENDSEK
DEKKPVKQKGRESVSDFVAKDKGDSPMIDERVPMNDERMESAEEERENKKEGEAEGKHKA
GAVCESSYKEREQHRVTTNPSRPKEAPLIELLAECFRIKHNPDNVHKQDTISKEPALDVQ
RKFFFGKKVPIEKTESEKERDMLWEEMDSLLRLGEVDSLVGCVETVETQQNTEAPATNCK
HKFVHDEETGIYCILCHWMIIDIKGMPVPFVSEYPREGSRKKLLSDGPNGLCFDDAPFGV
REGGYCNKEGTVWDLIPADTKQNLYAHQLEGFEFLWKNLAGTMELPKLKSCDSNSTGGCI
ISHAPGTGKTRLTIVFLQTYLKVFPDCHPMIIAPASLLLTWEDEFRKWDNEIPFHNLSNQ
DTSGKEHRAAWSKVGGSAPSQEDIRMVKLYSWFKEPSILGISYSLFQRLTGLKRDKSLKE
NAARGVMGKILLEVPGLLVLDEGHTPRNQSSQIWKVLSEIQTHKRIILSGTPFQNNFLEL
YNTICVVRPSFPDTIPPELKKFCQRRLMQEKKESKGLSWEPVSSVRTENLNDENIKQLKQ
LMDPFVHVHKGSILQKNLPGLKDCVVTLMPGDLQKTLLEGIEGHPNTLPFDSKSALVSVH
PSLFLCCTLSPKERALVDMEQLKDLKLNPTVGVKTRFLVEFVRICDAMNEKVLVFSQFLD
PLTLIMEQLKSIFNWTEKKEVFYMSGKLDKNQRQLLIHSFNDPNSQAKILLASTKACCEG
ISLVGASRVVLLDVVWNPSVERQAISRAYRLGQKKVVYTYHLITHGTTEYTKYCHQAKKD
RLSELVFSAKNTEQDEPKSSAVEFEDEILDNMVRHGKLRDLFGDCVVQPKDSDLIDNLDP
KIS
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atggtgatcgttaatggtgttgctagcagaacaagaagcaagaagaaagagaggtctttg
aatccgtcaccgtgtattggatcaggatcccgaacattgtcttcgtcgtcatcaaagtcc
agcgagagaaagaaggggaaaagaaaggctgaagttgatgttgaggttgtggaatttgac
tatgaggctttccatgaacgatggatgatggaacctcagcaacctcttgagatgcctccg
ccaagagacgtgattgaactcagcgatgatagtgatgataatgcagctgctgaggggttg
cagaagcttcatcgtgggtatgttaatgaagagaagaaggaagaagttcaagaaagaaac
gtgtttcctattgatggtgctggaacttctgccaacgatcctataatcgttggtttgagt
gatagtagtagtagtgatgaaggaagtgagggcggtggaagaagtttggactgggatttt
ggattatcaagtgagtcagaggacactgataacagtgatgacgaagatttcagagtggag
gatgagggagaaggttcagcttcagcatcagcttcagcatcaacttcagcttcaagcagt
gatgatagtggttcaagttcctttgatgatgaggatgaagaggaggaaaaggagaagagg
agatgtaagaggaggaagaaggagaagaagagaagagagccaacttttgagtctcatagc
aataaagttttgcgctgcgacgaggtgattgtggaaactgaatgctctggaatttgcaag
aagaatggtgagaataagaataattcatcctcaaccgagaataatgtgtttgatcatcag
ccagagaaaatgctaccaaaggatgcagattgtgctagtgttctctttggagaacgcaat
acggagggttgttcttcagaaaagaatgaagataaggaaaagaatgtagccaagaaaccg
gtggaggtttgttcttcaaaaaagaatgaagataaggaagagaatgtagctaagaaacca
gtggagggttgttcttcaaaaaagaatgcagattgtgctagtgttctctttggagatcgc
aatacggagggttgttcttcagaaaagaatgaagataaggaagccaagaaaccagcggag
ggttgttcttcaaaaaagaatgaagataaggaaaagaatgtagctaagaaaccagtggag
ggttgttcttcaaaaaataatgaagataaggaaaagaatgtggctaagaaaccagtggag
ggttgttcttcaaagaagaacgaagacaaaggaaagaaggtggcaaagaaaccaatgccg
gcggggaatagagcacggaagagagtggaaagaacaggagaaaatgttggtgctgatatt
gaagcctcttcccaaaagcgttcgcgtccatccacacctgaggagaatgattcagaaaag
gatgaaaagaaaccggtaaaacagaagggtcgtgaaagtgtgtctgattttgtggcaaag
gacaaaggggactcgccaatgatcgatgaaagagtgccgatgaatgatgaaagaatggag
agtgcagaggaagagagggagaacaagaaggaaggagaggctgaagggaagcataaggcc
ggggcggtttgcgaaagtagttacaaagagagggagcaacatagagtgacaacaaatcca
tctaggccaaaggaggcaccgttgattgaacttcttgctgaatgctttcggattaagcat
aatccagataatgttcataagcaagatacaatctcaaaggaaccagctctcgatgttcag
agaaaatttttttttggaaagaaagtgccaattgaaaaaactgaatccgagaaggagagg
gatatgttgtgggaagaaatggattctttgctcagactaggtgaagttgactccttggtt
ggctgtgttgagactgtcgaaacgcaacagaacacagaggctccggcaaccaattgtaag
cacaagtttgtccatgatgaagagactggaatatattgcatactctgccattggatgatc
atagacataaaaggcatgccggtaccctttgtgagtgagtatccaagagaaggatcaaga
aagaagctgctatctgatgggcctaatggcttatgctttgatgatgctccattcggtgtc
cgagaaggtggttactgtaacaaggaaggcacagtttgggacctgattccagcagatact
aagcaaaacctgtatgctcatcagcttgaaggttttgaattcctttggaaaaacttggca
ggaaccatggagcttcctaaattgaagagttgtgactcgaacagcacgggtggatgcatc
atttctcatgctccagggactggaaagacgcggctgaccatcgtgttccttcagacatac
ttgaaagtgtttccagattgccatcccatgattattgctcctgctagcttactgctaact
tgggaagatgagttcagaaagtgggacaatgagattccgttccataatttgagcaatcaa
gacacatcaggaaaagagcaccgagctgcatggagcaaagttggagggtctgctccaagc
caggaagatatccggatggtgaagctgtattcttggttcaaagaaccaagtattcttgga
atcagctacagtctatttcagaggcttaccggcttgaagcgtgataaaagcttgaaggag
aatgctgccagaggggtcatgggaaaaatccttcttgaagttcctggattgttggtattg
gatgaaggacacacgccacgaaatcagagtagtcagatttggaaggttctttctgagatt
caaactcacaagagaatcatcctttccgggactcctttccagaacaattttctggagctt
tacaatacaatctgcgtggtcagaccgtcctttccggataccatacctcctgagcttaaa
aagttctgccaaagaagattgatgcaagagaagaaagaatctaaaggtctcagttgggaa
ccagtttcttcagtcagaactgagaatctaaatgatgagaacatcaagcagttgaagcag
ctgatggatccatttgtgcatgttcacaaaggcagtattcttcagaagaatcttcctggc
ttgaaagactgcgtggtgactttaatgccaggtgatttgcagaaaacacttcttgagggc
attgaaggacatccaaatacattgccttttgatagcaagtcggccttggtgtctgtccat
ccatcccttttcctttgctgcactctttcacctaaggaaagagctcttgttgacatggaa
cagttgaaagacctcaaactgaatccaactgttggtgtcaaaacaagatttttggtggag
tttgtaaggatctgtgatgcaatgaacgagaaagtgcttgtgttcagccagttccttgat
cctttgactttaatcatggagcaattaaagtcaattttcaattggactgagaaaaaagaa
gttttctacatgagtggaaagctggataagaaccaaaggcagttactcattcattccttc
aatgatccaaacagccaagcaaagatcttgcttgcatccacaaaagcttgctgtgaagga
atcagtctggttggtgcttccagggtggtgctgctggatgtggtttggaacccctcggtc
gaaaggcaagctatcagccgtgcttataggctggggcaaaagaaggtggtctacacttac
catctcataacacatgggaccaccgagtatacaaaatactgccatcaggccaagaaggac
cggttgtctgaactagtcttttcagcaaagaacactgaacaggatgagcccaagagttct
gccgtggaattcgaggatgaaattctcgataacatggtgcgccatgggaaactgagggac
ttgtttggtgactgtgtggtgcagccaaaggactctgatttgattgataatttggatcct
aaaatttcctga
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