Arachis ipaensis: 107647828
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Entry
107647828 CDS
T04301
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
aip
Arachis ipaensis
Pathway
aip03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
107647828
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aip03019
]
107647828
04121 Ubiquitin system [BR:
aip04121
]
107647828
03036 Chromosome and associated proteins [BR:
aip03036
]
107647828
03400 DNA repair and recombination proteins [BR:
aip03400
]
107647828
Messenger RNA biogenesis [BR:
aip03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
107647828
Ubiquitin system [BR:
aip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
107647828
Chromosome and associated proteins [BR:
aip03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
107647828
DNA repair and recombination proteins [BR:
aip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
107647828
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
zf-HC5HC2H
BRCT_2
zf-C3HC4_3
zf-C3HC4
zf-RING_UBOX
zf-HC5HC2H_2
zf-RING_2
zf-C3HC4_2
zf-C3HC4_4
PTCB-BRCT
zf-RING_6
zf-RING_5
PHD_NSD
RTT107_BRCT_5
Prok-RING_4
zf-Nse
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
107647828
NCBI-ProteinID:
XP_016207360
LinkDB
All DBs
Position
B06:23324795..23330071
Genome browser
AA seq
702 aa
AA seq
DB search
MKSEFPSLSRTNNSTEQTARMDASRTSSSTGNKSNSTKLLNPWMLHFQKLALELKCPLCL
SLFKRPVLLPCNHLFCNSCLADFTTSGSECVVCNAKYAQSDIRHVPFVENVVGIYRSLDA
TFSASLFKQHSSDVRVLEPCQGLQNSVHRSKDTDNVGAGKNQKRKMSGLAVHDKGEEIEV
YSGGQVENPRRSSQMKIEGREDSGVVEMDVNQGTQSAPDSPPFCDTKGSENDCSDQDSEH
LLPSGALENSSSKRASTGNGNLKERMTQLRSESSASETEGLTRELKRQKNLTHGNDQLRT
EKDPGAVMLANVDDSYSSTCSFCQSSKISEATGPMLHCANGNLVIGDAAKQPNVIHVHKV
CSDWAPQVYFVGDTLKNVKTELSRAAKLKCSKCGLKGAALGCYVKSCRRTYHAPCAMDVS
NCRWDYEGYLLLCPGHSHVKFPSEKSKSRKQTTDKHPTSSHLPSQCSNDLGCSKDEDKKL
LFCGSALSTEEKILLINFASKIGAKVTKTWTLEVTHVIAATDENGACSRTLKVLMAILNG
KWVLKMDWVKASMEEMNPLGEEPYEITLDNQGCHGGPKAGRLRAMVNEPKLFTGLKFYLS
GDYVTTYKEDIEELIEVGGGAVLRSKEELEAKKLEFEGVPSKFLVVYNLDPPQGCKLGEE
VSIIWQRMNDAEELASSTGSEVIGHTWILESIAACKLQPFVI
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctgaattcccaagtctttcacgcacaaacaactcaacagaacaaaccgccaga
atggatgcttctagaacttcaagcagcaccggcaacaagagtaacagcaccaagctgctt
aatccatggatgctccatttccagaagctcgctcttgaactcaagtgccctctctgtttg
agcttgttcaagaggccggttttgctaccctgcaaccacttattctgcaattcgtgtttg
gcggatttcacaacgtctggttccgaatgtgttgtctgcaatgcgaagtatgctcaatca
gatataaggcatgtgccttttgtggaaaacgtggtagggatttataggagcttggatgca
accttttctgctagtttgtttaagcaacattcttctgatgtgagggttttggagccatgc
caagggttacaaaattcagttcataggagcaaggatactgataatgttggggctggcaag
aatcagaaacggaagatgagtggtcttgcggtgcatgataagggcgaggagattgaggtg
tattctggggggcaggttgagaatccaaggcggtcttcccagatgaaaattgagggtcgt
gaagactctggggttgttgaaatggatgtgaatcaagggacgcaatcagcaccagatagt
ccaccattttgtgacaccaagggctcagagaatgactgcagtgatcaagatagcgagcat
cttttgccttctggggcattggaaaattcctcatcgaaaagagcaagtacaggaaatgga
aatttgaaggaaagaatgacacaactgaggtctgaaagttcagcctctgaaacggagggt
cttacaagagagctcaagaggcagaaaaaccttacccatggtaatgatcaactcagaact
gaaaaggaccctggtgccgtgatgcttgctaatgtagatgactcttattcaagtacatgt
tcattttgccagtcctcaaaaatctcagaggctactggaccaatgctgcattgtgcaaat
gggaatttggttattggtgatgcagcaaagcaaccaaatgtcatccatgtacacaaagtt
tgcagtgattgggcaccacaagtttactttgttggtgacactcttaagaatgtgaagaca
gaactgtcaagggcagcaaagcttaaatgcagcaaatgtggcttaaagggagctgcactt
ggatgctatgtcaaatcctgcagaagaacttatcatgctccttgtgcaatggatgtctca
aattgccgttgggattatgagggttatcttttgctttgtcctggtcattctcatgtgaaa
tttcctagtgagaaatccaagtctaggaaacaaacaactgataagcatcccacttcatct
cacctgccatctcaatgttcaaacgatctgggatgttcaaaggatgaagataaaaaattg
cttttttgtggatctgctttatcaaccgaggaaaagatacttctgataaattttgcaagc
aagattggtgctaaagttaccaagacttggactttagaagtcacccatgtgattgcagct
actgatgaaaatggagcatgctctaggacactaaaagttcttatggcaattctaaatgga
aaatgggttctcaaaatggattgggtaaaagcaagcatggaagagatgaatcctcttgga
gaagaaccatatgagatcacacttgacaaccaagggtgtcacggtggcccaaaagctggc
agactcagggcaatggtcaatgagccaaagttatttactggcttaaagttttatttgtcc
ggagattatgtgacaacatataaggaagatattgaagaattaattgaagtgggaggaggt
gctgttttgagaagcaaagaagaattggaagcaaaaaagcttgaattcgaaggggttcct
tcgaagttccttgttgtttacaaccttgatcctccacagggatgcaagttaggagaggaa
gtttcgattatttggcaaagaatgaatgatgcagaggaactagcatctagtactggttct
gaagtcattggtcacacgtggattctggagtcaattgcagcatgtaaacttcagcctttt
gttatctaa
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