Arachis ipaensis: 107648494
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Entry
107648494 CDS
T04301
Name
(RefSeq) protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aip03021
]
107648494
Transcription machinery [BR:
aip03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
107648494
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
DUF7667
Cas3_HD
Motif
Other DBs
NCBI-GeneID:
107648494
NCBI-ProteinID:
XP_016207822
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All DBs
Position
B06:complement(11672280..11674286)
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AA seq
668 aa
AA seq
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MADLENMLLEAAGRTSSPHRKRHNSNSTSSKPRNQKSKRGDDGGSESRGEDSDAEGGGAS
KKKPPSSSRNVPLKKRLDLTKTERELGHEGELLEDDDDDDDDEDEESDVGSDLYKNEDDK
QRLANMTELEREMILSDRAAKKGEKEFKEQLRMKRDTNNNATSKNMINHQSPLPPPPPPS
SSSSKVRSSTRHAERTAAKGDVLSELRAKRMKQQVVDTHHGKPSSSSTNKGIPMKKKAAT
TSSSSSQSESGDSDRDSSEGLADSDDDDDKNMLRESNMPTFEEIKEITIRRSRLVKWLNE
PFFEELIVGCFVRIGIGKSESGAVYRLCMVQSVDGGDPNRHYKVENRITHKYLVCVWGSE
SSAKRFQMAVVSDSSPLEKEFRQWVREIERSCSHMPSKASVLDKREAIRRTNNYVYSAAT
VKQMLEEKKAAPTRPLNVAVEKDKLKRLMEVAKSKNDEAEVQRICAKLLELDAAREARDK
DSRAKRLAEMNRKNKVDNFKNLSEHRNLQVNLKLGEAGYDPFSRRWTRSRNYYNAEGKEI
KQEESHQVSNNREKHEIKVEEPSVSAGNAVGFKATEAALEAAASAGKLVDTLAPVDCGTE
SNMMHDFELPISLAELKDLGGPQGLKNGFLARKQKIEATVGLQVPENDGGRHALTLTISD
YKRRRGLL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcggacttggagaacatgcttctggaggcagctggaagaaccagctccccgcacaga
aagcgccacaatagtaatagtactagtagtaagccgcgaaaccagaaatccaaacgagga
gatgatggtggaagtgagtccagaggggaagactccgacgccgagggcggcggagcaagc
aagaagaagccgccatcgtcatcaaggaacgttcctctcaagaagaggttggacctcacc
aaaactgagagggaattaggccatgaaggagagttgttggaggatgatgatgatgatgat
gatgatgaagatgaagaatctgatgttggcagtgatctctacaagaatgaagatgacaag
cagaggctagcaaacatgactgagctcgaaagagagatgatactctccgatcgagctgcc
aaaaaaggcgaaaaggagttcaaagaacaattaagaatgaagagggacaccaacaacaat
gctacttcaaagaacatgatcaatcatcaatcacctcttccaccaccaccaccaccatca
tcatcttcctccaaggttcgttcctccaccagacacgccgagaggaccgccgccaaaggc
gatgtcttaagcgagttgcgagccaagaggatgaagcagcaagtggtagacactcaccat
ggaaaaccatcatcatcaagcaccaataaggggattccaatgaagaagaaagcagcaact
acttcaagtagctcaagccagagcgagagcggtgacagtgatagagattcctctgaaggg
ttggctgatagtgacgatgacgatgacaagaacatgttgagagaatcaaacatgccaacg
tttgaagaaatcaaggaaatcaccattaggagatcgaggcttgtgaagtggctgaatgaa
ccattctttgaagagttaattgttgggtgctttgttagaattgggattggaaaatcagag
agtggagctgtttacagactctgcatggttcagagtgttgatggtggcgatccaaatagg
cactacaaggttgagaacagaatcactcacaagtaccttgtttgtgtttggggaagtgaa
agctctgccaagaggttccaaatggctgtggtttcggattcttcgccgttggagaaagag
ttcaggcaatgggttagggaaattgagagaagttgcagccacatgccgagtaaggcgagt
gttttggacaagagagaggccattagaagaacgaataactatgtctactctgcagccact
gtgaagcagatgctggaggagaagaaagccgcgcctactcggccgcttaatgtcgcggtt
gagaaggacaagctgaagaggctgatggaggtagcaaagagcaagaacgatgaggccgag
gtgcagaggatctgcgccaagctcctggaattggacgcggcgcgcgaagccagggataag
gacagcagggctaaaagattagctgagatgaacagaaagaacaaggttgataatttcaag
aacttgtctgagcataggaatttgcaggtgaatttgaaattgggtgaggcagggtatgat
ccattctctaggaggtggacaaggtctaggaattactacaatgcagaagggaaagagatt
aaacaagaagagagtcatcaagttagtaataatagagagaagcatgaaattaaggttgaa
gaaccaagtgtgtcagcaggtaatgctgttgggtttaaagccacagaagcagcactggaa
gctgctgcaagtgcagggaaattggtggatactttggctccggtggattgcggaacagaa
tcaaacatgatgcatgatttcgagttgcctatttcactggctgaacttaaggatttgggc
ggaccacagggattgaagaatgggttcttggcaaggaaacagaagatagaagcaacggtt
gggttgcaggtgcctgaaaacgatggaggtaggcatgctctcacattaactatcagcgac
tacaagagaagaagagggctgttgtag
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