KEGG   Arachis ipaensis: 107648494
Entry
107648494         CDS       T04301                                 
Name
(RefSeq) protein RTF1 homolog
  KO
K15178  RNA polymerase-associated protein RTF1
Organism
aip  Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:aip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aip03021]
    107648494
Transcription machinery [BR:aip03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     107648494
SSDB
Motif
Pfam: Plus-3 DUF7667 Cas3_HD
Other DBs
NCBI-GeneID: 107648494
NCBI-ProteinID: XP_016207822
LinkDB
Position
B06:complement(11672280..11674286)
AA seq 668 aa
MADLENMLLEAAGRTSSPHRKRHNSNSTSSKPRNQKSKRGDDGGSESRGEDSDAEGGGAS
KKKPPSSSRNVPLKKRLDLTKTERELGHEGELLEDDDDDDDDEDEESDVGSDLYKNEDDK
QRLANMTELEREMILSDRAAKKGEKEFKEQLRMKRDTNNNATSKNMINHQSPLPPPPPPS
SSSSKVRSSTRHAERTAAKGDVLSELRAKRMKQQVVDTHHGKPSSSSTNKGIPMKKKAAT
TSSSSSQSESGDSDRDSSEGLADSDDDDDKNMLRESNMPTFEEIKEITIRRSRLVKWLNE
PFFEELIVGCFVRIGIGKSESGAVYRLCMVQSVDGGDPNRHYKVENRITHKYLVCVWGSE
SSAKRFQMAVVSDSSPLEKEFRQWVREIERSCSHMPSKASVLDKREAIRRTNNYVYSAAT
VKQMLEEKKAAPTRPLNVAVEKDKLKRLMEVAKSKNDEAEVQRICAKLLELDAAREARDK
DSRAKRLAEMNRKNKVDNFKNLSEHRNLQVNLKLGEAGYDPFSRRWTRSRNYYNAEGKEI
KQEESHQVSNNREKHEIKVEEPSVSAGNAVGFKATEAALEAAASAGKLVDTLAPVDCGTE
SNMMHDFELPISLAELKDLGGPQGLKNGFLARKQKIEATVGLQVPENDGGRHALTLTISD
YKRRRGLL
NT seq 2007 nt   +upstreamnt  +downstreamnt
atggcggacttggagaacatgcttctggaggcagctggaagaaccagctccccgcacaga
aagcgccacaatagtaatagtactagtagtaagccgcgaaaccagaaatccaaacgagga
gatgatggtggaagtgagtccagaggggaagactccgacgccgagggcggcggagcaagc
aagaagaagccgccatcgtcatcaaggaacgttcctctcaagaagaggttggacctcacc
aaaactgagagggaattaggccatgaaggagagttgttggaggatgatgatgatgatgat
gatgatgaagatgaagaatctgatgttggcagtgatctctacaagaatgaagatgacaag
cagaggctagcaaacatgactgagctcgaaagagagatgatactctccgatcgagctgcc
aaaaaaggcgaaaaggagttcaaagaacaattaagaatgaagagggacaccaacaacaat
gctacttcaaagaacatgatcaatcatcaatcacctcttccaccaccaccaccaccatca
tcatcttcctccaaggttcgttcctccaccagacacgccgagaggaccgccgccaaaggc
gatgtcttaagcgagttgcgagccaagaggatgaagcagcaagtggtagacactcaccat
ggaaaaccatcatcatcaagcaccaataaggggattccaatgaagaagaaagcagcaact
acttcaagtagctcaagccagagcgagagcggtgacagtgatagagattcctctgaaggg
ttggctgatagtgacgatgacgatgacaagaacatgttgagagaatcaaacatgccaacg
tttgaagaaatcaaggaaatcaccattaggagatcgaggcttgtgaagtggctgaatgaa
ccattctttgaagagttaattgttgggtgctttgttagaattgggattggaaaatcagag
agtggagctgtttacagactctgcatggttcagagtgttgatggtggcgatccaaatagg
cactacaaggttgagaacagaatcactcacaagtaccttgtttgtgtttggggaagtgaa
agctctgccaagaggttccaaatggctgtggtttcggattcttcgccgttggagaaagag
ttcaggcaatgggttagggaaattgagagaagttgcagccacatgccgagtaaggcgagt
gttttggacaagagagaggccattagaagaacgaataactatgtctactctgcagccact
gtgaagcagatgctggaggagaagaaagccgcgcctactcggccgcttaatgtcgcggtt
gagaaggacaagctgaagaggctgatggaggtagcaaagagcaagaacgatgaggccgag
gtgcagaggatctgcgccaagctcctggaattggacgcggcgcgcgaagccagggataag
gacagcagggctaaaagattagctgagatgaacagaaagaacaaggttgataatttcaag
aacttgtctgagcataggaatttgcaggtgaatttgaaattgggtgaggcagggtatgat
ccattctctaggaggtggacaaggtctaggaattactacaatgcagaagggaaagagatt
aaacaagaagagagtcatcaagttagtaataatagagagaagcatgaaattaaggttgaa
gaaccaagtgtgtcagcaggtaatgctgttgggtttaaagccacagaagcagcactggaa
gctgctgcaagtgcagggaaattggtggatactttggctccggtggattgcggaacagaa
tcaaacatgatgcatgatttcgagttgcctatttcactggctgaacttaaggatttgggc
ggaccacagggattgaagaatgggttcttggcaaggaaacagaagatagaagcaacggtt
gggttgcaggtgcctgaaaacgatggaggtaggcatgctctcacattaactatcagcgac
tacaagagaagaagagggctgttgtag

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