Arachis ipaensis: 107648685
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Entry
107648685 CDS
T04301
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 57 isoform X1
KO
K14779
ATP-dependent RNA helicase DDX52/ROK1 [EC:
5.6.2.7
]
Organism
aip
Arachis ipaensis
Brite
KEGG Orthology (KO) [BR:
aip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aip03009
]
107648685
Enzymes [BR:
aip01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107648685
Ribosome biogenesis [BR:
aip03009
]
Eukaryotic type
90S particles
Helicases
107648685
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
Helicase_C_2
Cas3-like_C_2
P-loop_SecA
Motif
Other DBs
NCBI-GeneID:
107648685
NCBI-ProteinID:
XP_016207979
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All DBs
Position
B06:30149204..30153286
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AA seq
537 aa
AA seq
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MANNSSFLFSGIRFDRKKFGNDIARFGKNKTTDDDTALKITDPVELKTEKTTGEQFQQKP
PSSKKRKRKGTSSDAVEGFSVFRNSASAAEPVDKSNDAVRADDEAIQLKKEHNRQLERDA
IFRKKNNIHVAGYNVPSPLQSFDELKTRYKCPRYLMRNITELGFKEPTPIQRQAIPVLLQ
DRECFACAPTGSGKTFAFVCPMLMKLKGPETGAIRAVILCHTRELSAQTYRECKKLAKGK
KFRIKLMTKHLSRNADFSKFPCDILISTPLRLRLAIRRKKVDLSRVEFLVLDESDKLFEP
ELFKQIDSIIKACSNPSIIRSLFSATLPDFVEDRARELMHDAVRVIIGRKNMASETIKQK
LIFTGSEEGKLLAIRQSFAESLNPPVLLFVQSKERAKELYGELAFDNIRVDVIHSDLSQE
QRENAVDNFRAGKTWVLIATDVVARGMDFKGVNCVINYDFPDSAAAYIHRIGRSGRAGRA
GEAITLYTEEDIPFLRNVANLMAASGCEVPSWLMDLQKKKWRKHRPKRDSISTKPDI
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atggccaacaactcgtcgtttttgttttccggcattcgttttgacagaaagaagtttgga
aacgacattgccaggttcgggaagaacaaaaccactgatgacgataccgccctcaagatt
acagaccctgttgaactcaaaaccgagaaaacgacgggggaacaattccaacagaaacca
ccttcttcgaagaagcggaagcgcaagggaacctcttctgatgcggttgaaggattcagt
gtatttagaaattctgcttctgcggcggagcctgtggataaatcgaatgatgcagtgagg
gctgatgatgaggccattcagctgaagaaggaacacaataggcaacttgagcgagatgct
atattcaggaagaagaataacatccatgtggctgggtataacgtgccatccccgcttcaa
agttttgatgaattgaaaactagatacaaatgtccaagatatttaatgcgcaatatcaca
gaacttggattcaaagaaccaactccaatccagaggcaggctattccagtacttttgcag
gatcgggaatgctttgcttgtgcacctactggctctggaaaaaccttcgcgtttgtgtgt
cctatgcttatgaaactcaaggggccagaaacaggtgccattcgcgctgttatactttgt
catacgcgtgaattatctgctcaaacataccgagagtgcaaaaagcttgccaagggaaaa
aagtttcgtatcaagttaatgactaaacatctttctagaaatgctgatttttcaaaattt
ccatgtgatatacttatatccacgccacttcggttacgcttggctatccggaggaagaag
gttgatctcagcagagttgagtttcttgtattggatgaatccgataagctgtttgagcct
gaactgtttaagcagattgattctattatcaaagcatgttcaaatccctcaataatacgc
tcactattcagtgccactttacctgattttgttgaggatcgagctcgagaactcatgcat
gatgctgttcgggtaattattggcagaaagaatatggcttctgaaacaattaagcaaaag
ttgatttttactggaagtgaagaaggaaaacttctagcaattcgtcaaagctttgcagag
agtctaaatcctccagtattgctttttgtgcaaagcaaggagcgagccaaggagctgtat
ggtgaacttgcatttgacaatattagagtggatgtcatccattctgatctgtctcaagaa
cagagggaaaatgctgttgataacttcagagctggcaaaacatgggttttgattgccact
gatgtagttgctcggggcatggatttcaaaggtgtgaactgtgtgatcaattatgatttc
ccagattctgctgccgcatatatccacaggattggtcgatctggcagagcagggagggca
ggagaagcaattactttgtacacggaggaagacattccattcttgcggaacgtagctaat
ttaatggcagcatcaggttgtgaggttccatcatggctcatggacttacaaaaaaagaag
tggagaaaacaccggccaaaaagagattcaatctcaaccaaaccagatatataa
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