Azospira inquinata: Azoinq_03875
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Entry
Azoinq_03875 CDS
T07865
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
aiq
Azospira inquinata
Pathway
aiq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aiq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Azoinq_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aiq03019
]
Azoinq_03875
03009 Ribosome biogenesis [BR:
aiq03009
]
Azoinq_03875
Enzymes [BR:
aiq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Azoinq_03875
Messenger RNA biogenesis [BR:
aiq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Azoinq_03875
Ribosome biogenesis [BR:
aiq03009
]
Prokaryotic type
rRNA helicases
Azoinq_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QWT49762
UniProt:
A0A975SNT5
LinkDB
All DBs
Position
complement(880440..882407)
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AA seq
655 aa
AA seq
DB search
MTSSIETFAQLGLSEPLLQALEAVGYETPSPIQAGCIPILMEGHDLLGQAQTGTGKTAAF
ALPVMQRLDLSLRQPQALVLAPTRELAIQVAEAFHSYAKFMPDFHVVPIYGGQSLGIQLK
QLSRGVHVVIGTPGRVMDHLERKSLDLSQLKTVVLDEADEMLRMGFIDDVSWILERTPET
HQTALFSATMPDAIRQVAQKYLANPQEVKIKSTTTTVEAIRQRYWQVSGLHKLDALTRIL
EVEEDLDAAIIFVRTKTATVELAQKLEARGYSASALNGDMNQQLRERTIEQLKSGGLDIV
IATDVAARGIDVPRISHVINYDIPYDVEAYVHRIGRTGRAGRQGNAILFVAPREMRMLRT
IERTTRQHIAPLSLPSREAVTDRRVAQFKERVMEVMENEDLSFFSDLVGGIEEEHEVEMK
QVAAALAFMAQKGRPLQLQEKPVRPDVREGEGNRARPERDGNRERKFDRDARDSREGRPP
REPREKRNREDRGRGRELPESAMVRYRIEVGRNQGATPKDIVGAIANEANIQSRYIGHIA
LFDDYSTVELPESLPKDVLHVLHDVEVRQSPLLIHRLDGESVVVPAKPQRQPRRWGNTNN
QEVGYVNQEQRLQAHGNKAYVGGGHNGNGGNGGNGGNGQQAFRRRTGPRKPRGNV
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgtccatcgaaacctttgcccaactgggcctttctgaacctttgctgcaagcc
ttggaggccgtggggtatgaaaccccgtcgcccatccaggcgggctgcatccccatcctt
atggaaggccacgatctgctgggccaggcccagaccggtacggggaaaaccgcggccttc
gccctgcccgtgatgcaacgcctggacctgtccctgcgccagccccaggccctggtcctg
gcccccacccgggaactggccattcaggtggcggaggcgttccatagctacgccaaattt
atgcccgatttccacgtggtgcccatctacggcggccaaagcctggggattcagctcaag
cagctgtcccggggcgtacacgtggtgatcggtactccgggccgggtgatggaccacctg
gagcggaagagcctggacctgtcccagctcaagaccgtggtgctggacgaagcggatgaa
atgctgcgcatgggcttcatcgacgacgtgtcctggattctggaacggaccccggaaacc
caccagaccgccctgttttccgccaccatgccggacgccatccgccaggtggctcagaag
tatctggccaatccccaggaagtgaagatcaaatccaccaccaccacggtggaagccatc
cgccagcgttactggcaggtctccggcctgcacaagctggatgccctgacccgcattctt
gaagtggaagaggatctggacgcggccatcattttcgtgcgcaccaagaccgccactgtg
gaactggcccagaagctggaagcccggggctattccgcctccgccctgaacggggacatg
aaccagcagctgcgggaacggaccattgaacagctgaagagcggcggcctggacatcgtc
atcgccacggacgtggcggcccggggcattgacgtgccccgtatcagtcacgtgatcaac
tacgacattccctacgacgtggaagcctatgtgcaccgcatcggccgtaccggccgggcc
gggcgccagggcaatgccattctcttcgtggcgccccgggaaatgcgcatgctgcgcacc
atcgaacgcacgacccggcagcacatcgctcccctttccctgccctcccgggaagcggtg
accgaccgtcgcgtggcccagttcaaggaacgggtcatggaagtgatggaaaacgaagac
ctgagcttcttctccgacctggtgggcggtatcgaggaagaacacgaggtggaaatgaag
caggtcgccgccgccctggccttcatggcccagaaggggcgtcccctgcaactccaggaa
aagccggtccgtcccgatgtccgggaaggggaaggcaaccgggcccgtccggaacgggac
ggcaaccgggaacggaaatttgaccgggacgcccgggatagtcgggaagggcgtcctcct
cgggaaccccgggaaaagcgcaaccgggaagaccggggccggggtcgggaactgccggaa
agcgccatggtgcgttaccgcatcgaagtgggccgcaaccagggcgctacgcctaaggac
atcgtgggcgccattgccaacgaagccaacattcagagccgttacatcggccacatcgcc
ctctttgacgattacagcacggtggaactgccggaaagcctgcccaaggacgtactgcac
gtgctccacgacgtggaagtgcggcaaagccccctgctcatccatcgtctggatggggaa
tccgtggtggtgccggccaaaccccagcgccaaccccgccggtggggcaacaccaataac
caggaagtgggctatgtgaatcaggaacagcgtctgcaagcccatggcaacaaggcctat
gtgggcggcggtcacaatggcaacggagggaatgggggcaatggtggcaacggccagcaa
gccttccgccgccgcaccggtccccgtaagccccggggcaatgtgtaa
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