Azospira inquinata: Azoinq_04975
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Entry
Azoinq_04975 CDS
T07865
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aiq
Azospira inquinata
Pathway
aiq03030
DNA replication
aiq03430
Mismatch repair
aiq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Azoinq_04975 (dnaE)
03430 Mismatch repair
Azoinq_04975 (dnaE)
03440 Homologous recombination
Azoinq_04975 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aiq03032
]
Azoinq_04975 (dnaE)
03400 DNA repair and recombination proteins [BR:
aiq03400
]
Azoinq_04975 (dnaE)
Enzymes [BR:
aiq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Azoinq_04975 (dnaE)
DNA replication proteins [BR:
aiq03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Azoinq_04975 (dnaE)
DNA repair and recombination proteins [BR:
aiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Azoinq_04975 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
P63C
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QWT49958
UniProt:
A0A975SPB4
LinkDB
All DBs
Position
complement(1102363..1105800)
Genome browser
AA seq
1145 aa
AA seq
DB search
MTDPRFIHLRLHSEFSITEGIVRLDAAIERAETDGMPAFALTDLAAGFGLVKFYRAARPH
GIKPIFGSDLWLANEADPTNPYRLLLLVGDQDGYLRLCELLSKAYLVPDRPERAEIRRAW
LDELGCGGLIALSGADHGDIGEALRNGKPALAAERAREWARRFPDSFYLEVQRYGQPQQE
AMVRDTVALAAELDLPLVATHPIQFMDREDFKAHEARVCIAQGYVLGDRRRPRNFTEEQY
FKTQGEMAELFADLPEALENTVEIAKRCNVNLVLGKNFLPQFPTPDGVSLDDYLAKTARD
GLEVRLAQLYPDPEERLARRPEYDARLEREINTVIQMGFPGYFLIVADFINWGKNNGVPV
GPGRGSGAGSLVAYSIGITDLDPLRYALLFERFLNPERVSMPDFDVDFCQDNRGRVIDYV
RHRYGLDAVSQIATFGTMSSKAVIRDVGRVLDLPYSLCDSLSKLIPVEQNKPLSLTKAIE
AEPQLKEKIDSEEEIKELFELAMKLEDTTRNIGMHAGGVVIAPGKLTEYSPLYCQLGSDS
VVTQYDKDDVEKVGLVKFDFLGLRNLTIIKLAVDYVERLTGSCPDLLALGYEDQAAYQIL
KDANTTAIFQVESEGMKKLLKKLQPDRFEDIIAVLALYRPGPLGSGMVDDFILRKKGQQK
IDYFHEDLKAALEPTYGVIVYQEQVMQIAQIIGGYTLGGADLLRRAMGKKKVEEMAKHRD
IMREGARKKGYDENLAMQLFDLMEKFAEYGFNKSHTAAYAVVTYQTAWLKAHHCAAFMAA
TMSVDMDNTDSVKIFVEDTLKNGVTILGPDVNASDYRFVPVDPKTIRYGLGGVKGTGQQA
VECILAAREADGPFKDLFDFCRRVDKRMVNRRTVEALIRAGSFDSLDPDRHKMLASVGIA
LEAAEQVQRDALQAGLFDAGPASVETAVDFVSVPPWDERERLMQEKQALGFFFSGHPFDA
VKGEVSRFVRRNLSQLEPQKDFQLLAGLVTGVRTKITQRGKMAFIQLDDGSDMKEVSVFS
ETFDANRQRLKEDEVLVVEGKVQKDDFSGGLRIVAENIYTLAEARGRFARQLRLAMNGNG
DARKLQNLIAPYVSPEGCPIRIAYTNPVASCELLLGEKARVRPDEELLKSLRDWLTPEAV
DLQYQ
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatccccgctttatccacctccgtctccacagcgagttttccatcaccgaaggc
atcgtccgtctggacgcggccatcgagcgggcggaaacggacggcatgccggccttcgcc
ctcaccgatctggccgccggtttcggcctggtgaagttctaccgggcggcccggccccac
ggcattaagcctattttcggcagcgacctgtggctggccaacgaggcggaccccaccaat
ccctatcggctgctcttgctggtgggggaccaggatggttacctgcgcctctgcgagctg
ctctccaaggcctatctggtgccggaccggccggagcgggcggaaatccgccgggcctgg
ctggacgagctgggctgcggcggcctcatcgccctgtccggcgccgaccacggggacatc
ggggaagccctgcgcaacggcaagcccgccttggcggcggagcgggcccgggaatgggcc
cggcgtttccccgacagtttctacctggaggtgcagcgctacggccagccccagcaggaa
gccatggtgcgggatacggtggccctggcggcggagctggacctgcccctggtggccacc
caccctatccagttcatggatcgggaagacttcaaggcccacgaggcccgggtctgtatt
gcccagggctatgtgctgggggatcggcgccggccccggaatttcaccgaggaacagtat
ttcaagacccagggggaaatggcggaactcttcgccgacctgcccgaggccctggaaaac
acggtggaaatcgccaagcgctgcaatgtgaatctggtgctgggcaaaaacttcctgccc
cagttccccacgccggatggggtgagcctggacgattacctggccaagaccgcccgggac
ggcctggaagtgcgcctggcccagctttacccggacccggaggagcgcctggcccggcgc
cccgagtacgatgcccgcctggaacgggaaatcaacacggtgatccagatggggttcccg
ggctacttcctcatcgtggcggactttattaactggggcaaaaacaatggggtgcccgtg
ggcccgggccggggctccggggccggctccctggtggcctacagcatcggcattacggac
ctggaccccctgcgctacgccctgttgttcgaacgcttcctgaacccggaacgggtgtcc
atgcctgactttgacgtggacttctgccaggacaaccggggccgggtgatcgactacgtg
cgccaccgttacggcctggacgccgtgtcccagatcgccaccttcggcaccatgtcctcc
aaggcggtgatccgggacgtgggccgggtgctggacctgccctacagcctctgcgactcc
ctctccaagctcattccggtggagcagaacaagcccctgtccctcaccaaggccattgaa
gccgagccccagctcaaggaaaaaatcgactcggaagaggaaatcaaagaactcttcgag
ctggccatgaagctggaggacaccacccggaacatcggcatgcacgccgggggcgtggtg
atcgccccgggcaagctcaccgaatacagccccctctactgccagctgggttcagattcc
gtggtaacccagtacgacaaggacgacgtggaaaaagtcggcctggtgaagttcgacttt
ctcgggctgcgcaacctgaccatcatcaagctggcggtggattacgtggagcggctcacc
gggagctgccccgatctgctggctctgggctacgaggaccaggcggcctaccagattctc
aaggatgccaacaccaccgccatcttccaggtggaatcggagggcatgaaaaagctgctg
aaaaagctgcagccggaccgcttcgaagacatcatcgctgtgctggccctctaccggccg
ggccccttgggttccgggatggtggatgactttattctgcggaaaaagggccagcagaaa
atcgactatttccacgaagacttgaaagccgccctggagcccacctacggggtgatcgtg
taccaggaacaggtgatgcagatcgcccagatcatcggcggctacaccctggggggcgcc
gacttgctgcgccgggccatggggaagaaaaaagtcgaggaaatggccaagcaccgggac
atcatgcgggagggcgcacgcaagaaaggctacgatgaaaatctggccatgcagctcttc
gacttgatggagaagtttgccgaatacggcttcaacaagtcccacaccgccgcctatgcg
gtggtcacctaccagaccgcctggctcaaggcccaccattgcgccgccttcatggccgcc
accatgtccgtggacatggacaacacggattcggtgaaaattttcgtggaggacaccctg
aaaaacggggtgaccatcctggggccggacgtgaatgcctcggattaccgctttgtcccg
gtggatcccaagaccatccgctatggcctgggcggggtcaaaggcacgggccagcaggcg
gtggaatgcattctggccgcccgggaagcggacggccccttcaaggacctgttcgatttc
tgccgccgggtggataagcgcatggtgaaccggcgcacggtggaagccctgatccgggcc
ggttccttcgattccctggacccggaccggcacaagatgctggcctccgtgggcatcgcc
ctggaagcggcagaacaggtccagcgggacgccctccaggcgggtctctttgatgccggt
cccgcctccgtggaaacggcggtggatttcgtcagcgtgcccccctgggatgagcgggaa
cggctcatgcaggaaaagcaggccctgggctttttcttctccggccacccctttgacgcg
gtgaagggagaagtgtcccgcttcgtgcgccgcaacctgtcccagctggaaccccagaag
gattttcagctcctggccgggctggtcaccggggtgcgcaccaaaattacccagcggggc
aaaatggccttcatccagctggacgacggcagcgatatgaaggaagtgtccgtcttcagc
gaaaccttcgacgccaaccggcagcgcctcaaggaagacgaggtgctggtggtggaaggc
aaggtgcagaaggacgacttttccggcggcctgcgcattgtggcggaaaacatttacacc
ctggccgaagcccggggccgtttcgcccgccagctgcgcctggccatgaacggcaacggg
gatgcccgcaaactgcaaaacctgatcgccccctatgtgagcccggaaggctgccccatc
cgcattgcctacaccaacccggtggcgtcctgcgaactgctcctgggggaaaaggcccgg
gtgcgccccgacgaggaattgctcaaaagcctgcgggactggctgacgccagaagccgtg
gatttgcaatatcaatag
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