Azospira inquinata: Azoinq_07520
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Entry
Azoinq_07520 CDS
T07865
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aiq
Azospira inquinata
Pathway
aiq02020
Two-component system
aiq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aiq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Azoinq_07520
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Azoinq_07520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aiq03021
]
Azoinq_07520
Transcription machinery [BR:
aiq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Azoinq_07520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Xre-like-HTH
HTH_IclR
HTH_38
HTH_23
Sigma70_r4
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QWT47732
UniProt:
A0A975XTH0
LinkDB
All DBs
Position
complement(1648988..1650490)
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AA seq
500 aa
AA seq
DB search
MKPTLQLKLSQHLALTPQLQQSIRLLQLSTLELNQELEKYLTENPLLEREDEDFDGPSGP
AAGEGSDSAAPDPAGTTPRETERGEDDSREHGEPGESAETGIRASDEGNALAAGEDDGWY
AEGSYPSASRDEEDDSDYQDIQAASTSLRDHLAWQLGLTPLSDRDRNLVRFLIEALDDDG
YLTQPLEELADALPPELEIDLDDLLIALRHLQHFDPTGVGARSPQECLALQLEALPPEPT
RDLALQLVRQYLELLAGRDFTKLKKLLGCDDDQLRAAAHLVKSLNPRPGAQYAPLDTRYI
IPDVVVRKLRNQWVASINPDAYPRLRINRLYSDILSKHRGSSLAGQLQEARWLIKNVQQR
FDTILRVSQAIVERQRQFFEHGEVAMRPLVLREIAEVLGLHESTVSRVTTQKYMATPRGI
FELKYFFGSHVATEAGGACSATAIRALIKQLIGGEDAKKPLSDSQISEILGQQGIVVARR
TIAKYREALNIPPANLRKTI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgaccctccaacttaaactttcccagcatttggcgctcacgccccaactgcaa
caatccatccggttgttgcagctgtccacgctggaactgaaccaggagctggagaagtac
ctgacggaaaatcccctcctggaacgggaggacgaggatttcgacggtccttccgggcct
gccgccggggaaggaagtgacagtgcggcccctgatccggcgggcaccacgccccgggaa
acggagcggggcgaggatgatagccgggagcacggggagccgggggaaagcgccgaaacg
ggcatccgtgccagcgacgagggcaatgccctggccgccggggaggatgacggctggtat
gcggagggcagctatccttccgcctcccgggacgaagaagacgattcggattaccaggac
atccaggccgccagcacctccctgcgagaccatctggcctggcagttaggcctcaccccc
ctgagtgaccgggaccggaatctggtacgctttctcattgaagccctggacgacgacggc
tacctgacccagcccctggaagaactggcggacgccctgcccccggagctcgaaatcgac
ctggacgacctgctcatcgccctgcgccacctccagcatttcgaccccaccggagtgggg
gcccgctctccccaggaatgcctggccctgcaactggaagccctgcccccggaacccacc
cgggatctggccctgcaactggtgcgccagtatctggaactcctggccggacgggacttc
accaagctgaaaaagctcctgggctgtgacgacgaccagctacgggccgccgcccatctg
gtgaagagcctcaatccccgccccggggcccagtacgcccccctggatacccgctacatt
attcccgacgtggtggtgcgcaagctacgcaaccagtgggtggccagcatcaacccggac
gcctatccccggctgcgcatcaaccgcctgtattcggatattctctccaaacaccggggc
tcctccctggctggccagctccaagaagcccgctggctgatcaagaacgtacagcagcgc
tttgacaccattctgcgggtctcccaggccatcgtggaacgccagcgccagttcttcgaa
cacggggaagtggccatgcgccccctggtactgcgggaaatcgccgaggtgctggggctc
cacgaatccaccgtttcccgggtcaccacccagaaatacatggccaccccccggggcatt
ttcgaactcaagtatttcttcggcagccacgtggccacggaagcggggggcgcctgttcc
gccaccgccatccgggccctgatcaagcagttgattggcggggaagatgcgaaaaagccc
ctttccgacagccagatttccgagattctcgggcaacagggcattgtggtggcccgccgg
accatagcaaaataccgggaggcgttgaacatcccgccggctaacctacgcaagaccatc
taa
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