Azospira inquinata: Azoinq_11735
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Entry
Azoinq_11735 CDS
T07865
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
aiq
Azospira inquinata
Pathway
aiq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aiq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Azoinq_11735 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aiq03021
]
Azoinq_11735 (rho)
03019 Messenger RNA biogenesis [BR:
aiq03019
]
Azoinq_11735 (rho)
Transcription machinery [BR:
aiq03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
Azoinq_11735 (rho)
Messenger RNA biogenesis [BR:
aiq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Azoinq_11735 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
OB_RNB
S1CSD-TOTE-2
NACHT
Mor
AAA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QWT48516
UniProt:
A0A975SLG1
LinkDB
All DBs
Position
complement(2559753..2561012)
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AA seq
419 aa
AA seq
DB search
MHLSELKTLHVSQLLEMAVTNEIEGANRLRKQELIFALLKKHAKRGESIFGDGVLEVLPD
GFGFLRSPDTSYLASTDDIYVSPSQIRRFNLHTGDTIEGEIRTPKDGERYFALVKVDRIN
YEPPEACKSKILFENLTPLHPTEHLKLERDIRAEENTTSRIVDMISPIGKGQRGLLVAPP
KSGKTVMLQHIAHAITANHPDVHLIVLLIDERPEEVTEMQRTVRGEVVASTFDEPATRHV
VVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVQPASGKVLTGGMDANALQKPKRF
FGAARNIEEGGSLTIIATALVETGSRMDDVIYEEFKGTGNMEIHLDRRMAEKRIYPAINV
NRSGTRREELLLKPDVLQKMWVLRKLLYNMDDLEAMEFLLDKVKATKTNGEFFDAMRRG
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgcatctatccgaactgaagaccctccatgtcagccaactgctggagatggctgtcacc
aatgaaatcgagggtgccaaccgcctgcgcaagcaggaactgatttttgccctgctgaaa
aagcacgccaaacgcggcgagagcattttcggcgacggcgtcctggaagtcctgcccgac
ggtttcggctttctccgctccccggacacttcctatctggccagtacggatgacatttat
gtctccccctcccagatccgtcgcttcaatctgcacaccggggacaccatcgaaggggaa
atccgtacccccaaggacggagaacggtacttcgccctggtaaaagtggatcggatcaac
tacgagccgccggaagcctgcaagagcaagattctctttgaaaacctcacccccctccat
cccacggaacacctgaagctggaacgggacattcgggctgaggaaaacaccacttcccgc
atcgtggacatgatttcccccatcggcaaaggccaacgcggcctgctggtggcgcccccc
aagtccgggaagacggtgatgctgcaacacatcgcccacgccattacggccaatcatccg
gatgtccatctcatcgtcctgctcatcgacgaacgtccggaagaagtgacggaaatgcag
cgcacggtgcggggcgaagtggtggcctccaccttcgacgaaccggctacccgccacgtg
gtggtagcggaaatggtcattgaaaaggccaagcgcctagtggaacacaaaaaggatgtg
gtcatcctgctggactccatcacccgtctggcccgggcctacaacacggtgcagcccgcc
tccggcaaggtgctcaccgggggcatggacgccaacgccctgcaaaagcccaagcgcttc
ttcggcgccgcccggaacattgaggaaggcggctccctcaccattattgccaccgccctg
gtcgaaaccggctcccgcatggacgacgtgatctacgaagaattcaagggcacgggcaac
atggaaatccacctggaccggcgtatggcggaaaaacgcatctacccggccattaacgtg
aaccgttccggcacccgccgggaagagttgctgctcaagcccgacgtgctgcaaaaaatg
tgggtactgcgcaagctgctctacaacatggacgacctggaagccatggaattccttctg
gacaaggtgaaagccaccaagaccaacggggaattcttcgacgccatgcggcgtggctaa
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