Azospira inquinata: Azoinq_13685
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Entry
Azoinq_13685 CDS
T07865
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aiq
Azospira inquinata
Pathway
aiq03410
Base excision repair
aiq03430
Mismatch repair
aiq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aiq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Azoinq_13685 (recJ)
03430 Mismatch repair
Azoinq_13685 (recJ)
03440 Homologous recombination
Azoinq_13685 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aiq03400
]
Azoinq_13685 (recJ)
DNA repair and recombination proteins [BR:
aiq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Azoinq_13685 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Azoinq_13685 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Azoinq_13685 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Glyco_transf_4
DUF2478
Motif
Other DBs
NCBI-ProteinID:
QWT48857
UniProt:
A0A975XUJ8
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All DBs
Position
complement(3025811..3027523)
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AA seq
570 aa
AA seq
DB search
MTRILPRSVPPRLQWQLEQQGLHPLLARIYAARGIQSRQELEYGFNQLLPPQDLTRAEEA
AQLLADAIEAGARMVIVADYDCDGATACAVGMRAMKAFCAGTEAHIDYLVPNRFTYGYGL
SPEIVALAAQQQPDLIITVDNGIASLEGVAAARDLGIATLVTDHHLPGDSLPEADCIVNP
NQPGCTFPSKNLAGVGVMYYVMLALRAELRRRGAFQDKPEPNLGALLDLVALGTVADVVK
LDHNNRILVAQGLKRMREGRLCPGLAALFRAAGRDTSQASAFDLGFTIGPRLNAAGRLAD
MGLGIECLITDDPARAANIAQQLDQLNRERREIEAEMQEQAYARLEALDGLESEVGAGIA
LFDGEWHQGVVGILASRLKDKLHRPIFAFARGDNGQIKGSGRSIPGLHLRDALDLVSKRA
PGLLLRFGGHAMAAGATLMETDFERFRELFAQVAEELLDPAAMTRTLETDGGLESGYFSL
EVAKLLAGEVWGQGFPPPLFDDVFQVESQRVLKDKHLKLRLRKDQARLDAIQFNATESPG
DRARVAYRLAINDYNGVQTPQLIVEHCAPV
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcatcctgccccgatccgttccgccccggctgcaatggcagctggaacaacaa
ggtctccaccccctgctggcccgcatttacgccgcccggggcatccagagccggcaggag
ctggaatacggcttcaatcagctgctccccccccaagacctgacccgagccgaggaagca
gcccaactgctagcggatgccatcgaggcgggggcccgcatggtcatcgtcgctgactac
gactgcgatggggccaccgcctgcgccgtgggtatgcgggccatgaaggccttctgcgcc
ggcaccgaggcccatatcgactatctggtgcccaaccgcttcacctacggctacggcctg
tccccggaaatcgtggccctggcggcccagcagcagccggacctgatcattacggtggat
aacggcattgccagcctggaaggggtggccgccgcccgggacctgggcattgccaccctg
gtcacggaccaccacttgcccggggacagccttccggaggcagactgcatcgtcaatccc
aatcagccgggctgtaccttcccgagtaaaaatctggccggggttggggtgatgtactac
gtcatgcttgccctgcgggccgaactgcgccgccggggcgcttttcaggataagccggag
cccaatctgggagccctgctggatttggttgccctgggcacggtggcggacgtggtcaag
ctggaccacaacaaccgcatcctggtggcccagggtttgaagcgcatgcgggaaggccgg
ctctgcccgggcctggccgccctcttccgggccgccgggcgggacaccagccaggcctcc
gcctttgacctgggcttcaccattggcccccggctcaatgcggcgggccgtctggcggac
atgggcctgggcatcgaatgcctgattacggacgatccggcccgggccgccaacatcgcc
cagcagctggatcagctcaaccgggaacggcgggaaatcgaggcggaaatgcaggaacag
gcctacgcccggctagaagccctggacggcctggagagcgaagtgggggcgggtatcgcc
ctgttcgacggggaatggcaccagggagtggtgggcattctggcctcccgcctaaaggac
aaactgcaccgacccattttcgcctttgcccggggcgacaacggccagatcaaaggctcg
ggccgttccattcccggtctgcacctgcgggacgccctggatctggtctccaagcgggcc
cccgggctactgctgcgctttggcggccacgccatggccgcgggggcaacccttatggaa
acggactttgagcgcttccgggaactgttcgcccaggtcgcagaggaattactggacccg
gcggccatgacccgcaccctggaaacggacggaggcctggaatcgggctatttcagtctg
gaagtggccaagctgctggccggggaagtgtggggccagggtttcccgccccccctcttc
gacgacgtgttccaggtggaaagccagcgggtgctcaaggacaagcacctgaaactacgg
ctgcgcaaggatcaggcccggctggacgccatccagttcaatgccaccgaatcccccggg
gaccgggcccgggtggcctaccggctagccatcaacgactacaacggggtgcagaccccc
cagctcattgtcgagcactgcgccccggtatag
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