Actinomyces israelii: AIF0345_0172 Help Entry AIF0345_0172      CDS       T06659                                  Symbol rhlE_3 Name (GenBank) ATP-dependent RNA helicase RhlE   KO K03724   ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4] Organism air  Actinomyces israelii Brite KEGG Orthology (KO) [BR:air00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:air03400]     AIF0345_0172 (rhlE_3) Enzymes [BR:air01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      AIF0345_0172 (rhlE_3)     5.6.2.6  RNA 3'-5' helicase      AIF0345_0172 (rhlE_3) DNA repair and recombination proteins [BR:air03400]  Prokaryotic type   Other factors with a suspected DNA repair function    DNA helicases     AIF0345_0172 (rhlE_3) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD_assoc WHD_Lhr DEAD WHD_2nd_Lhr WHD_3rd_Lhr WHD_4th_Lhr Helicase_C ResIII PhoH Motif Other DBs NCBI-ProteinID:  WKR20301 LinkDB All DBs Position 202068..207788 Genome browser AA seq 1906 aa AA seqDB search MIAEPTAAPGLPDAFAPATRAWFGSVFPDGPTPVQERAWAAIGRGENALVIAPTGSGKTL AAFLSAIDRLLRDPPPGRGATRDGSPPGHGRRGVRVLYISPLKALGADVERNLRHPLAGI TETAAELGAPAVPVGVGVRSGDTPAAERRRLRTRPPDILITTPESLYLMLTSAVRQTLRT VETVIVDEIHSFAATKRGTHLALSLERLDDLLERPAQRIGLSATVAPREEIARFLGGTRA VTIVADDGRTAPEVTVTVPVIDMARVPATADRRARMDRALAGPTDAIRRERRGRPGRGDD VRAWRSDRALRQALARGLDGANGVEDAGGPRGAGGTDADGLAPTDPVGGESTDRAGRGRA SQTTASIWPHIEEAILDQVLAHRTTLVFVNSRGACERLTAHLNEAHAMRVAAGGGTGPGS DSGAGADSSARPGGATGDPRMTSAVDAHGTSPALAGPAEPAPESAGPAPGRARLAPKPAE PAPARHHESWEMGETKRAQPLPADTPVIARAHHGSVSKEQRLAVERELKSGRLRCVVATA SLELGIDMGAIDLVLQVAPPPSIASGLQRVGRADHRVGGRPHGTIYPIERTQLIDAAVAA EGMRAGAIERSALVANALDVLAQQTVAAASVEDLDADDWYATVRRAAPYRELPRVSYDSV LELLAGGYASADLAGFAPRLVRDRDTGALTARPGAQRLAVTASGTIPDRGMFPVVLPEGA QDGGRRRVGELDEEMVNETAVGDIITLGTTSWRVREIGADRVVVDPAPGRSSRLPFWRGD GPGRPAATGAARGAFLREASAGLSDVPAAGPDATSSPSAPVPAPELAAGPGATPDLLDRL AAAGLDANARANLIALLREQRAATGVVPSDTTLVLEQYEDESGGLRIILHSPYGRRVHEP WAMAIRERVQQLLDLAPQIVVADDGIVLQVPALQSRGPGGGRAGARDRLLGGELVVFDAE ELTRLVRSRIDGTALFAARFRECAARALLMPVASPGRRTPLWLQRITSGRLLEAAGQFRD FPVLVEAARECLQDVYDLPALADLMKRIAAGTVRLVDAATPTPSPFARPLLFGYTAALLY QEDLPRAERRAHLLSLDPDALAALVGDDAADLLDEEVLARVEAELQRLAPGRRARPDAEG VADLLRELGPLTIDELVARCRGGEEHGEAAGDGDAHADRVDGASGTGSVDRADGAGGEED GGAEAQDPRRTEPLVAEPAVRGALAELERARRALPVLIGGRPHWTRAEDAAVLHAALGVD IPVWAGNQGDIVRRTAGRGPLDDLVLRHARTRARVTVRGVADAFGLGTAVAGESLARLAG ENALVRLDGTRGHSPESARGVLGDDTGGARGPREDAGGGAGENAAGEWWMAPAVLRRVRN LSLARAREAIRPVSPHALQRLVLTRAGLVEPRAGIDALADAVAALEGVWLPAAAWETTVL PTRVSDYRPAMLDELIASGDVIWRARGGAVSADGTAGGTGRGGSESAAGRGEAPGSPAEI AFYPSDSPLAPEIGEPVDAQHADEVWALAVRGLATAASFEPVRRGLSPGPVAAPRRRVRS RRGRRRYADLLGPRAPAARAAASADGAWPADGASPEDRGGAAEAVGALTAAGGAGAGSGN ASGSAAASLVATATWRRLRDPRVDDVETALAGVESVLDRYGVLTPDIALAAGLPGGLGPL MPLLRRMEDTGALLRGRFVEGLGPVQFAERETVEVLRSLAERDGDAGRGTDGARTRRACA GGDGAAGRASASGPPVVVDIKDPACLVGRGVPWPDPALPPEQMGSPGASGAGEGTAVERP TRRGDAKVVLVDGRPVLHATGGWRSLTSFTTEESEFDAALAALVVAGRAEVRAAVMKGEG RASRRIVERVNGRPASGREMSALLGRAGLVRDPKGMRLVVDPYGRR NT seq 5721 nt NT seq  +upstreamnt  +downstreamnt atgatcgccgaaccgaccgcagccccggggctcccggatgccttcgcccccgcgacccgg gcctggttcggctccgtcttcccggacggcccgacgccggttcaggagcgcgcctgggcg gccatcggccgtggcgagaacgcgctggtcatcgcgcccaccggttcgggcaagacgctg gccgctttcctgtccgccatcgaccggctcctccgggacccaccgcccggccgcggcgcg acccgggacgggagcccgcccggccacggccgccgcggcgtgcgggtgctgtacatatcc ccgctcaaggccttgggcgccgacgtcgagcgcaacctgcgacatccgctggccgggatc accgagaccgccgcggagctcggagcaccggccgttccggtgggtgtgggcgtgcgctcg ggcgatacgcccgccgccgagcgccgtcgtctgcgcacccgcccgccggacatcctcatc acgacgccggaatccctctacctcatgctcacctccgccgtgcggcagacgctgcgcacc gtcgagaccgtcatcgtcgatgagatccactccttcgccgccaccaagcgcggcacgcac ctggcgctgtccctggagcgcctcgacgacctcctcgaacggccggcccagcgcatcggc ctgtccgccaccgtcgccccgcgcgaggagatcgcccgattcctcggcggaacccgcgcc gtcaccatcgtcgccgacgatgggcgcacggcaccggaggtgactgtgaccgtgcccgtc atcgacatggcccgggtgccggccaccgcggacaggcgcgcccgcatggaccgggctctc gccgggcccaccgacgccatccgtcgggagcgtcgcgggcgcccgggcaggggagacgac gtgcgggcgtggcgctcggaccgcgccctgcggcaggccctcgcccggggactggatggt gccaacggggttgaggatgctggcggcccgcgcggcgcgggcggcaccgatgcggacggc ctcgccccgacggacccggtgggcggcgagtccacggatcgggcgggtcgtgggcgcgcc tcccagacgacggcctccatctggccgcacatcgaggaggcgatcctcgaccaggtactc gctcaccgtaccaccctcgtcttcgtcaactcccgcggagcctgcgagcggctgaccgcc cacctcaacgaggcccacgccatgcgcgtcgctgccgggggcggcactgggcccgggtcg gactccggtgccggggccgactcgagtgcccgacccggtggggcgacgggcgatccgcgg atgaccagcgccgtggatgcccatgggacgagccccgcgttggcagggcccgccgagccc gcgccggagtccgctgggcccgcaccggggcgagcccgccttgcacccaagcccgccgag cccgcgcccgcccgccaccacgagtcctgggagatgggcgagaccaagcgcgctcagccc ctgccggccgacacccccgtcatcgccagggcccaccacgggtccgtctccaaggagcag cgcctcgccgtcgagcgcgagctgaagtccgggcggctgcgctgcgtggtcgccaccgcc tccctcgaactgggcatcgacatgggtgccatcgacctggtcctccaggtcgcgcccccg ccctcgatcgcctccggtctgcagcgcgtgggccgcgccgaccaccgcgtcggcgggcgg ccgcacggcaccatctacccgatcgagcgcacccagctcatcgacgccgccgtcgccgcc gagggcatgcgcgcgggcgccatcgagcgctccgcgctggtcgccaacgccctggacgtc ctcgcccagcagaccgtcgcggcggcgagcgtcgaggacctggacgccgacgactggtac gccaccgtccgccgagccgccccctaccgggagctgccgcgcgtctcctacgactccgtc ctggaactgctcgccggcggctacgcctccgcggacctcgccggcttcgccccgcgcctc gtgcgggaccgggacaccggtgcgctcaccgcccgccccggcgctcagcgcctggccgtc accgcctccgggaccatccccgaccgcggcatgttccccgtcgtcctgcccgagggcgct caggacggcggacggcgccgcgtgggcgagctcgacgaggagatggtcaacgagaccgcc gtcggcgacatcatcaccctggggaccacgagctggcgggtgcgtgagatcggtgccgac cgcgtcgtcgtcgaccccgcccccggccgcagctcccgcctgcccttctggaggggcgac gggcccgggcgccccgccgccacaggcgccgcccggggcgccttcctgcgcgaggcctcc gcgggactgagcgacgtcccggcggctggccccgatgcgacctcctccccgtccgccccg gtacccgctcccgagctcgccgccgggcctggcgcgacgcccgacctcctggaccgcctg gccgccgccggactggacgcgaacgcccgggccaatctcatcgccctgctgcgcgagcag cgggccgccaccggcgtcgtccccagtgacaccaccctcgtgctggagcagtacgaggac gagagcggcggcctgcggatcattctccacagcccctacgggaggcgcgtccacgagccg tgggccatggcgatccgcgagcgcgtgcagcagctgctcgacctcgccccgcagatcgtc gtcgccgacgacgggatcgtcctccaggtgccggccctccagagccgcgggccgggcggc gggcgggccggcgcgcgggatcgtctgctcggaggcgagctcgtcgtcttcgacgccgag gagctgacccgcctcgtgcgctcgcggatcgacggcacggccctgttcgccgcccgcttc cgcgagtgcgccgctcgcgccctgctcatgccggtggcgagtcccggacggcgcacaccc ctgtggctccagcgcatcacgtccggtcggctcctcgaggccgccggccagttccgcgac ttccccgtcctggtggaggcggcgcgcgagtgcctccaggacgtctacgacctgcccgcc ctggccgatctcatgaagcggatcgccgcggggacggtgcgcctcgtcgatgctgcgacc ccgacgccctcgcccttcgcccgcccgctcctcttcggctacacggccgccctgctctac caggaggacctgccgcgcgccgagcgccgcgcccacctgctgtccttggatcccgacgcc ctcgccgcgctggtcggcgacgacgcggccgatctgctggacgaggaggtcctggcgagg gtcgaggccgagctgcagcggctcgctccagggcggcgggcgcggcccgacgccgaaggg gtcgccgatctgctgcgcgagctcggtccgctgacgatcgacgagctggtcgcccggtgc cggggcggggaggagcacggtgaggcggccggggatggtgatgcgcatgcggaccgagtc gacggtgcgagcgggaccggttccgtggaccgagccgacggtgcgggcggggaagaggac ggcggtgcggaggcccaggatccgcgccgcactgagccgctcgtcgccgagcccgccgtc cgcggtgcgctcgccgagctggagcgcgctcgtcgggccctgcccgtgctgatcggcggg cgtcctcactggacgcgtgccgaggacgccgcggtgctgcacgccgccctgggcgtcgac atccccgtctgggccgggaatcagggtgacatcgtccgacgcactgccggccgcggcccg ctggacgacctcgtcctgaggcacgcgcgcacccgtgcgcgtgtcaccgttcggggcgtc gccgacgccttcggcctcgggacggccgtggccggggagtccctcgcgcggctggccggg gagaacgccctggtgcgactcgacgggactcgtgggcactcccccgagagcgctcgcggt gtcctcggggacgacaccggcggtgctcggggaccccgcgaggatgccgggggcggcgct ggtgagaatgcagccggcgagtggtggatggcgcccgccgtcctgaggcgcgtgcgcaac ctgtccctggcccgggcgcgggaggccatccgacccgtgagtccgcatgccctccagcga ctcgtgctgacccgcgccggactggtcgagccgcgcgcgggcatcgacgcgctcgccgac gccgtcgccgccctggagggagtgtggttgccggccgccgcctgggagacgacggtcctg ccgacgcgcgtgagcgactaccggcccgccatgctcgacgagctcatagcctccggcgac gtcatctggcgggcgaggggcggggccgtgtcggcggacgggaccgcggggggcaccggg agaggcggttctgagagcgccgccggaaggggagaggcccccggctcaccggccgagatc gccttctacccctccgactcgccgttggcccccgagatcggcgagcccgtcgacgcccag cacgccgacgaggtctgggctctggccgtccgcggcctggccaccgcggcctccttcgag ccggtgcgccgcggtctgagcccgggcccggtcgcagcgccgcgcaggcgggtgcgcagc cgtcgtggtcgccgacgctacgcggatctcctcggtccacgggccccggcggcacgggcc gccgcctcggccgatggcgcctggccggccgatggggcgagcccggaggatcggggcggg gcggccgaggccgtcggggccctcaccgccgcgggcggggccggtgcgggcagtgggaac gcgagcggctccgccgccgcgtccctcgtggcgacagcgacctggcgccggctgcgggat ccacgagtcgacgacgtcgagaccgccctggccggcgtcgagtccgtcctggaccgttac ggcgtcctcacaccggatatcgcgctcgcggcgggactgcccggcggactcggaccgctc atgcctctgctgcgccggatggaggacaccggggcgctgctgcgcgggcggttcgtcgag gggctcggcccggtccagttcgccgagcgggagaccgtcgaggtgctgcgctccctcgcc gagcgggacggcgatgcgggccggggcacggacggtgcacgcacccggcgcgcatgcgct ggcggcgacggggccgcgggccgggcgagcgcgtccggtcctcccgtcgtcgtcgacatc aaggaccccgcctgcctcgtgggccgcggtgtgccctggcccgacccggcgctgccgccg gagcagatgggatcgcccggcgcgtccggggccggggaggggaccgccgtcgagcggccc acgaggcgcggggatgcgaaggtcgtcctcgtcgacggccgacccgtcctgcacgcgacc gggggctggcggtcgctgacgtccttcacgacggaggagagcgagttcgacgctgctctg gccgcgctcgtcgtcgccgggcgggccgaggtccgggccgccgtcatgaagggggagggg cgggcgtcacgccgtatcgtcgagcgcgtcaacgggcgtcccgcgtcggggcgggagatg agcgccctgctcggccgggccgggctggtgcgcgatcccaagggcatgcgactggtcgtc gatccctacggtcgtcgctga

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